Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf1Q9EPU4 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf1Q9EPU4 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf1Q9EPU4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Cpsf1Q9EPU4 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC19.82■□□□□ 0.76
Cpsf1Q9EPU4 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf1Q9EPU4 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cpsf1Q9EPU4 Gm37305-201ENSMUST00000195714 4279 ntBASIC19.81■□□□□ 0.76
Cpsf1Q9EPU4 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cpsf1Q9EPU4 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cpsf1Q9EPU4 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cpsf1Q9EPU4 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cpsf1Q9EPU4 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC19.81■□□□□ 0.76
Cpsf1Q9EPU4 Gm4804-201ENSMUST00000182234 999 ntBASIC19.81■□□□□ 0.76
Cpsf1Q9EPU4 Gm4971-201ENSMUST00000205991 1108 ntBASIC19.81■□□□□ 0.76
Cpsf1Q9EPU4 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cpsf1Q9EPU4 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Cpsf1Q9EPU4 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Cpsf1Q9EPU4 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cpsf1Q9EPU4 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cpsf1Q9EPU4 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cpsf1Q9EPU4 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cpsf1Q9EPU4 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC19.8■□□□□ 0.76
Cpsf1Q9EPU4 Gm14452-201ENSMUST00000118680 1632 ntBASIC19.8■□□□□ 0.76
Cpsf1Q9EPU4 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Cpsf1Q9EPU4 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cpsf1Q9EPU4 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cpsf1Q9EPU4 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cpsf1Q9EPU4 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cpsf1Q9EPU4 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC19.8■□□□□ 0.76
Cpsf1Q9EPU4 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC19.8■□□□□ 0.76
Cpsf1Q9EPU4 Gm9797-201ENSMUST00000052902 613 ntBASIC19.8■□□□□ 0.76
Cpsf1Q9EPU4 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cpsf1Q9EPU4 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cpsf1Q9EPU4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cpsf1Q9EPU4 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Cpsf1Q9EPU4 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cpsf1Q9EPU4 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Cpsf1Q9EPU4 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cpsf1Q9EPU4 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cpsf1Q9EPU4 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cpsf1Q9EPU4 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf1Q9EPU4 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf1Q9EPU4 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
Cpsf1Q9EPU4 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf1Q9EPU4 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf1Q9EPU4 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC19.79■□□□□ 0.76
Cpsf1Q9EPU4 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf1Q9EPU4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Cpsf1Q9EPU4 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
Cpsf1Q9EPU4 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf1Q9EPU4 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf1Q9EPU4 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC19.79■□□□□ 0.76
Cpsf1Q9EPU4 Gm8584-201ENSMUST00000171982 758 ntBASIC19.79■□□□□ 0.76
Cpsf1Q9EPU4 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC19.79■□□□□ 0.76
Cpsf1Q9EPU4 Gm8515-201ENSMUST00000194852 576 ntBASIC19.79■□□□□ 0.76
Cpsf1Q9EPU4 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC19.79■□□□□ 0.76
Cpsf1Q9EPU4 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC19.79■□□□□ 0.76
Cpsf1Q9EPU4 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf1Q9EPU4 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC19.79■□□□□ 0.76
Cpsf1Q9EPU4 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf1Q9EPU4 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf1Q9EPU4 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf1Q9EPU4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf1Q9EPU4 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf1Q9EPU4 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cpsf1Q9EPU4 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpsf1Q9EPU4 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cpsf1Q9EPU4 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Cpsf1Q9EPU4 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
Cpsf1Q9EPU4 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC19.78■□□□□ 0.76
Cpsf1Q9EPU4 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpsf1Q9EPU4 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC19.78■□□□□ 0.76
Cpsf1Q9EPU4 Gm15823-201ENSMUST00000064305 670 ntBASIC19.78■□□□□ 0.76
Cpsf1Q9EPU4 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpsf1Q9EPU4 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpsf1Q9EPU4 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Cpsf1Q9EPU4 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC19.78■□□□□ 0.76
Cpsf1Q9EPU4 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpsf1Q9EPU4 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpsf1Q9EPU4 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpsf1Q9EPU4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cpsf1Q9EPU4 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf1Q9EPU4 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Cpsf1Q9EPU4 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf1Q9EPU4 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Cpsf1Q9EPU4 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC19.77■□□□□ 0.76
Cpsf1Q9EPU4 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC19.77■□□□□ 0.76
Cpsf1Q9EPU4 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC19.77■□□□□ 0.76
Cpsf1Q9EPU4 AC154846.1-201ENSMUST00000226278 862 ntBASIC19.77■□□□□ 0.76
Cpsf1Q9EPU4 Gm37297-201ENSMUST00000192974 2384 ntBASIC19.77■□□□□ 0.76
Cpsf1Q9EPU4 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf1Q9EPU4 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf1Q9EPU4 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf1Q9EPU4 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf1Q9EPU4 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf1Q9EPU4 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cpsf1Q9EPU4 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cpsf1Q9EPU4 AC168058.1-201ENSMUST00000219521 2282 ntBASIC19.77■□□□□ 0.75
Cpsf1Q9EPU4 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms