Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rsph3bQ9DA80 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.91■□□□□ 0.14
Rsph3bQ9DA80 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.91■□□□□ 0.14
Rsph3bQ9DA80 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rsph3bQ9DA80 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rsph3bQ9DA80 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rsph3bQ9DA80 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.91■□□□□ 0.14
Rsph3bQ9DA80 Gm9063-201ENSMUST00000223299 582 ntBASIC15.91■□□□□ 0.14
Rsph3bQ9DA80 Wdyhv1-203ENSMUST00000226889 394 ntBASIC15.91■□□□□ 0.14
Rsph3bQ9DA80 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rsph3bQ9DA80 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rsph3bQ9DA80 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rsph3bQ9DA80 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rsph3bQ9DA80 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.91■□□□□ 0.14
Rsph3bQ9DA80 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rsph3bQ9DA80 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rsph3bQ9DA80 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rsph3bQ9DA80 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.91■□□□□ 0.14
Rsph3bQ9DA80 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15.91■□□□□ 0.14
Rsph3bQ9DA80 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rsph3bQ9DA80 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rsph3bQ9DA80 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.91■□□□□ 0.14
Rsph3bQ9DA80 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.91■□□□□ 0.14
Rsph3bQ9DA80 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rsph3bQ9DA80 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rsph3bQ9DA80 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rsph3bQ9DA80 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rsph3bQ9DA80 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rsph3bQ9DA80 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rsph3bQ9DA80 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rsph3bQ9DA80 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rsph3bQ9DA80 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Rsph3bQ9DA80 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rsph3bQ9DA80 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rsph3bQ9DA80 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Rsph3bQ9DA80 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.9■□□□□ 0.14
Rsph3bQ9DA80 Gm5866-201ENSMUST00000177881 973 ntBASIC15.9■□□□□ 0.14
Rsph3bQ9DA80 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.9■□□□□ 0.14
Rsph3bQ9DA80 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rsph3bQ9DA80 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Rsph3bQ9DA80 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rsph3bQ9DA80 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rsph3bQ9DA80 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rsph3bQ9DA80 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rsph3bQ9DA80 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rsph3bQ9DA80 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rsph3bQ9DA80 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rsph3bQ9DA80 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Rsph3bQ9DA80 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.9■□□□□ 0.14
Rsph3bQ9DA80 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rsph3bQ9DA80 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Rsph3bQ9DA80 BC037039-201ENSMUST00000192003 2205 ntBASIC15.9■□□□□ 0.14
Rsph3bQ9DA80 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Rsph3bQ9DA80 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.14
Rsph3bQ9DA80 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Gm6222-201ENSMUST00000120787 396 ntBASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Gm27680-201ENSMUST00000184192 160 ntBASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Gm29310-201ENSMUST00000185468 696 ntBASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Gm21825-201ENSMUST00000185728 696 ntBASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Gm29109-201ENSMUST00000185895 696 ntBASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Gm21896-201ENSMUST00000186520 696 ntBASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Gm21873-201ENSMUST00000186728 696 ntBASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Gm21794-201ENSMUST00000187056 696 ntBASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Gm21880-201ENSMUST00000187275 696 ntBASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Gm21826-201ENSMUST00000187451 696 ntBASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Gm21198-201ENSMUST00000188393 696 ntBASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Gm21749-201ENSMUST00000189343 696 ntBASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Gm21901-201ENSMUST00000189568 696 ntBASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Gm29424-201ENSMUST00000189716 696 ntBASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Gm28599-201ENSMUST00000189838 694 ntBASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Gm21867-201ENSMUST00000189917 696 ntBASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Gm29269-201ENSMUST00000190087 696 ntBASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Gm21722-201ENSMUST00000190153 696 ntBASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Gm28423-201ENSMUST00000190701 696 ntBASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Gm21899-201ENSMUST00000190745 696 ntBASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Gm21910-201ENSMUST00000191163 696 ntBASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Gm21849-201ENSMUST00000191571 696 ntBASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Gm28678-201ENSMUST00000191593 696 ntBASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Gm20910-201ENSMUST00000193268 696 ntBASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Gm21871-201ENSMUST00000194621 696 ntBASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Olfr286-202ENSMUST00000205305 969 ntBASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Rsph3bQ9DA80 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms