Protein–RNA interactions for Protein: Q9D9N2

Cldn34b2, Claudin 34B2, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn34b2Q9D9N2 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn34b2Q9D9N2 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn34b2Q9D9N2 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn34b2Q9D9N2 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn34b2Q9D9N2 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn34b2Q9D9N2 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn34b2Q9D9N2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn34b2Q9D9N2 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cldn34b2Q9D9N2 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.36□□□□□ -0.11
Cldn34b2Q9D9N2 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b2Q9D9N2 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b2Q9D9N2 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b2Q9D9N2 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.35□□□□□ -0.11
Cldn34b2Q9D9N2 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Cldn34b2Q9D9N2 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b2Q9D9N2 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b2Q9D9N2 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b2Q9D9N2 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b2Q9D9N2 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b2Q9D9N2 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b2Q9D9N2 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b2Q9D9N2 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC14.35□□□□□ -0.11
Cldn34b2Q9D9N2 Gm5566-201ENSMUST00000116118 459 ntBASIC14.35□□□□□ -0.11
Cldn34b2Q9D9N2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b2Q9D9N2 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b2Q9D9N2 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b2Q9D9N2 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b2Q9D9N2 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b2Q9D9N2 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b2Q9D9N2 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b2Q9D9N2 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b2Q9D9N2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Cldn34b2Q9D9N2 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b2Q9D9N2 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cldn34b2Q9D9N2 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b2Q9D9N2 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b2Q9D9N2 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.35□□□□□ -0.11
Cldn34b2Q9D9N2 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b2Q9D9N2 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cldn34b2Q9D9N2 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cldn34b2Q9D9N2 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Gm6222-201ENSMUST00000120787 396 ntBASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Gm9719-201ENSMUST00000162765 543 ntBASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cldn34b2Q9D9N2 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cldn34b2Q9D9N2 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cldn34b2Q9D9N2 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Cldn34b2Q9D9N2 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cldn34b2Q9D9N2 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cldn34b2Q9D9N2 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cldn34b2Q9D9N2 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Cldn34b2Q9D9N2 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Cldn34b2Q9D9N2 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn34b2Q9D9N2 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn34b2Q9D9N2 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn34b2Q9D9N2 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Cldn34b2Q9D9N2 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Cldn34b2Q9D9N2 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms