Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Trim42Q9D2H5 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Trim42Q9D2H5 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim42Q9D2H5 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim42Q9D2H5 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim42Q9D2H5 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim42Q9D2H5 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.54□□□□□ -0.08
Trim42Q9D2H5 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Trim42Q9D2H5 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim42Q9D2H5 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim42Q9D2H5 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.54□□□□□ -0.08
Trim42Q9D2H5 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim42Q9D2H5 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim42Q9D2H5 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.54□□□□□ -0.08
Trim42Q9D2H5 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim42Q9D2H5 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim42Q9D2H5 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim42Q9D2H5 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim42Q9D2H5 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trim42Q9D2H5 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Gm6659-201ENSMUST00000174752 547 ntBASIC14.53□□□□□ -0.08
Trim42Q9D2H5 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim42Q9D2H5 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.52□□□□□ -0.08
Trim42Q9D2H5 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trim42Q9D2H5 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.52□□□□□ -0.08
Trim42Q9D2H5 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim42Q9D2H5 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim42Q9D2H5 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim42Q9D2H5 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim42Q9D2H5 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim42Q9D2H5 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim42Q9D2H5 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Trim42Q9D2H5 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim42Q9D2H5 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Trim42Q9D2H5 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim42Q9D2H5 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Trim42Q9D2H5 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim42Q9D2H5 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Trim42Q9D2H5 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim42Q9D2H5 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim42Q9D2H5 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim42Q9D2H5 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim42Q9D2H5 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim42Q9D2H5 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim42Q9D2H5 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim42Q9D2H5 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Trim42Q9D2H5 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim42Q9D2H5 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim42Q9D2H5 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim42Q9D2H5 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim42Q9D2H5 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim42Q9D2H5 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim42Q9D2H5 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim42Q9D2H5 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim42Q9D2H5 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim42Q9D2H5 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim42Q9D2H5 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim42Q9D2H5 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim42Q9D2H5 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim42Q9D2H5 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim42Q9D2H5 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim42Q9D2H5 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim42Q9D2H5 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim42Q9D2H5 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms