Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx56Q9D0R4 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx56Q9D0R4 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ddx56Q9D0R4 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx56Q9D0R4 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx56Q9D0R4 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.26■□□□□ 0.03
Ddx56Q9D0R4 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.26■□□□□ 0.03
Ddx56Q9D0R4 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx56Q9D0R4 Gm25911-201ENSMUST00000157621 56 ntBASIC15.26■□□□□ 0.03
Ddx56Q9D0R4 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx56Q9D0R4 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.26■□□□□ 0.03
Ddx56Q9D0R4 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.26■□□□□ 0.03
Ddx56Q9D0R4 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx56Q9D0R4 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx56Q9D0R4 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx56Q9D0R4 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ddx56Q9D0R4 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ddx56Q9D0R4 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx56Q9D0R4 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx56Q9D0R4 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ddx56Q9D0R4 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx56Q9D0R4 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx56Q9D0R4 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx56Q9D0R4 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx56Q9D0R4 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx56Q9D0R4 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ddx56Q9D0R4 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx56Q9D0R4 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx56Q9D0R4 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx56Q9D0R4 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.25■□□□□ 0.03
Ddx56Q9D0R4 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx56Q9D0R4 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx56Q9D0R4 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.25■□□□□ 0.03
Ddx56Q9D0R4 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.25■□□□□ 0.03
Ddx56Q9D0R4 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.25■□□□□ 0.03
Ddx56Q9D0R4 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.25■□□□□ 0.03
Ddx56Q9D0R4 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.25■□□□□ 0.03
Ddx56Q9D0R4 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx56Q9D0R4 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx56Q9D0R4 Gm18737-201ENSMUST00000173594 937 ntBASIC15.25■□□□□ 0.03
Ddx56Q9D0R4 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx56Q9D0R4 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx56Q9D0R4 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx56Q9D0R4 Gm15500-202ENSMUST00000071641 1019 ntBASIC15.25■□□□□ 0.03
Ddx56Q9D0R4 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ddx56Q9D0R4 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx56Q9D0R4 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC15.25■□□□□ 0.03
Ddx56Q9D0R4 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx56Q9D0R4 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ddx56Q9D0R4 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Ddx56Q9D0R4 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx56Q9D0R4 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.25■□□□□ 0.03
Ddx56Q9D0R4 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx56Q9D0R4 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx56Q9D0R4 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx56Q9D0R4 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx56Q9D0R4 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx56Q9D0R4 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.25■□□□□ 0.03
Ddx56Q9D0R4 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ddx56Q9D0R4 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ddx56Q9D0R4 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx56Q9D0R4 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx56Q9D0R4 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx56Q9D0R4 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx56Q9D0R4 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.24■□□□□ 0.03
Ddx56Q9D0R4 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Ddx56Q9D0R4 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ddx56Q9D0R4 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Ddx56Q9D0R4 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx56Q9D0R4 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx56Q9D0R4 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx56Q9D0R4 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.24■□□□□ 0.03
Ddx56Q9D0R4 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx56Q9D0R4 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC15.24■□□□□ 0.03
Ddx56Q9D0R4 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.24■□□□□ 0.03
Ddx56Q9D0R4 Gm18057-201ENSMUST00000208220 503 ntBASIC15.24■□□□□ 0.03
Ddx56Q9D0R4 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Ddx56Q9D0R4 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ddx56Q9D0R4 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx56Q9D0R4 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx56Q9D0R4 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.24■□□□□ 0.03
Ddx56Q9D0R4 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.24■□□□□ 0.03
Ddx56Q9D0R4 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx56Q9D0R4 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx56Q9D0R4 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx56Q9D0R4 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.24■□□□□ 0.03
Ddx56Q9D0R4 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx56Q9D0R4 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ddx56Q9D0R4 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.24■□□□□ 0.03
Ddx56Q9D0R4 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Ddx56Q9D0R4 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Ddx56Q9D0R4 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx56Q9D0R4 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx56Q9D0R4 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx56Q9D0R4 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.23■□□□□ 0.03
Ddx56Q9D0R4 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx56Q9D0R4 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx56Q9D0R4 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Ddx56Q9D0R4 Gm4995-201ENSMUST00000117247 432 ntBASIC15.23■□□□□ 0.03
Ddx56Q9D0R4 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms