Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssu72Q9CY97 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ssu72Q9CY97 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ssu72Q9CY97 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssu72Q9CY97 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssu72Q9CY97 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssu72Q9CY97 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssu72Q9CY97 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssu72Q9CY97 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssu72Q9CY97 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ssu72Q9CY97 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ssu72Q9CY97 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ssu72Q9CY97 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ssu72Q9CY97 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ssu72Q9CY97 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ssu72Q9CY97 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ssu72Q9CY97 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Ssu72Q9CY97 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.4□□□□□ -0.1
Ssu72Q9CY97 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ssu72Q9CY97 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssu72Q9CY97 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
Ssu72Q9CY97 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssu72Q9CY97 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
Ssu72Q9CY97 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssu72Q9CY97 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ssu72Q9CY97 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ssu72Q9CY97 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
Ssu72Q9CY97 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ssu72Q9CY97 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Ssu72Q9CY97 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Ssu72Q9CY97 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ssu72Q9CY97 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssu72Q9CY97 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssu72Q9CY97 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssu72Q9CY97 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ssu72Q9CY97 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssu72Q9CY97 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssu72Q9CY97 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssu72Q9CY97 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.39□□□□□ -0.11
Ssu72Q9CY97 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ssu72Q9CY97 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssu72Q9CY97 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssu72Q9CY97 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssu72Q9CY97 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssu72Q9CY97 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssu72Q9CY97 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssu72Q9CY97 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssu72Q9CY97 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssu72Q9CY97 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ssu72Q9CY97 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssu72Q9CY97 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssu72Q9CY97 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.39□□□□□ -0.11
Ssu72Q9CY97 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssu72Q9CY97 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ssu72Q9CY97 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssu72Q9CY97 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssu72Q9CY97 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ssu72Q9CY97 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ssu72Q9CY97 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ssu72Q9CY97 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms