Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Nip7Q9CXK8 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nip7Q9CXK8 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nip7Q9CXK8 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.99■□□□□ 0.47
Nip7Q9CXK8 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Nip7Q9CXK8 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nip7Q9CXK8 Sybu-209ENSMUST00000228639 4113 ntBASIC17.99■□□□□ 0.47
Nip7Q9CXK8 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nip7Q9CXK8 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nip7Q9CXK8 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nip7Q9CXK8 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.99■□□□□ 0.47
Nip7Q9CXK8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Nip7Q9CXK8 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nip7Q9CXK8 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nip7Q9CXK8 Gm14452-201ENSMUST00000118680 1632 ntBASIC17.98■□□□□ 0.47
Nip7Q9CXK8 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nip7Q9CXK8 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nip7Q9CXK8 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nip7Q9CXK8 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nip7Q9CXK8 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nip7Q9CXK8 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC17.98■□□□□ 0.47
Nip7Q9CXK8 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Nip7Q9CXK8 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC17.98■□□□□ 0.47
Nip7Q9CXK8 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC17.98■□□□□ 0.47
Nip7Q9CXK8 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC17.98■□□□□ 0.47
Nip7Q9CXK8 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nip7Q9CXK8 AC125350.2-201ENSMUST00000224737 727 ntBASIC17.98■□□□□ 0.47
Nip7Q9CXK8 AC154806.6-201ENSMUST00000228192 202 ntBASIC17.98■□□□□ 0.47
Nip7Q9CXK8 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Nip7Q9CXK8 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nip7Q9CXK8 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nip7Q9CXK8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nip7Q9CXK8 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nip7Q9CXK8 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nip7Q9CXK8 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nip7Q9CXK8 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nip7Q9CXK8 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Nip7Q9CXK8 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Nip7Q9CXK8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.97■□□□□ 0.47
Nip7Q9CXK8 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nip7Q9CXK8 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.97■□□□□ 0.47
Nip7Q9CXK8 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nip7Q9CXK8 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nip7Q9CXK8 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Nip7Q9CXK8 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC17.97■□□□□ 0.47
Nip7Q9CXK8 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC17.97■□□□□ 0.47
Nip7Q9CXK8 Gm12341-201ENSMUST00000119724 503 ntBASIC17.97■□□□□ 0.47
Nip7Q9CXK8 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.97■□□□□ 0.47
Nip7Q9CXK8 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC17.97■□□□□ 0.47
Nip7Q9CXK8 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nip7Q9CXK8 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC17.97■□□□□ 0.47
Nip7Q9CXK8 Gm18062-201ENSMUST00000208020 547 ntBASIC17.97■□□□□ 0.47
Nip7Q9CXK8 Gm18055-201ENSMUST00000208254 547 ntBASIC17.97■□□□□ 0.47
Nip7Q9CXK8 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC17.97■□□□□ 0.47
Nip7Q9CXK8 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nip7Q9CXK8 CT030657.3-201ENSMUST00000222707 1200 ntBASIC17.97■□□□□ 0.47
Nip7Q9CXK8 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nip7Q9CXK8 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC17.97■□□□□ 0.47
Nip7Q9CXK8 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nip7Q9CXK8 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nip7Q9CXK8 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC17.97■□□□□ 0.47
Nip7Q9CXK8 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Nip7Q9CXK8 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nip7Q9CXK8 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nip7Q9CXK8 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Nip7Q9CXK8 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nip7Q9CXK8 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nip7Q9CXK8 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Nip7Q9CXK8 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
Nip7Q9CXK8 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nip7Q9CXK8 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nip7Q9CXK8 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nip7Q9CXK8 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.96■□□□□ 0.47
Nip7Q9CXK8 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nip7Q9CXK8 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nip7Q9CXK8 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nip7Q9CXK8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nip7Q9CXK8 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nip7Q9CXK8 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Nip7Q9CXK8 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC17.96■□□□□ 0.47
Nip7Q9CXK8 Gm15678-201ENSMUST00000117573 960 ntBASIC17.96■□□□□ 0.47
Nip7Q9CXK8 Gm15824-201ENSMUST00000119516 955 ntBASIC17.96■□□□□ 0.47
Nip7Q9CXK8 Gm12882-201ENSMUST00000121696 517 ntBASIC17.96■□□□□ 0.47
Nip7Q9CXK8 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC17.96■□□□□ 0.47
Nip7Q9CXK8 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nip7Q9CXK8 Gm17150-201ENSMUST00000165577 381 ntBASIC17.96■□□□□ 0.47
Nip7Q9CXK8 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Nip7Q9CXK8 Gm21470-201ENSMUST00000187680 696 ntBASIC17.96■□□□□ 0.47
Nip7Q9CXK8 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC17.96■□□□□ 0.47
Nip7Q9CXK8 Gm6266-201ENSMUST00000203844 806 ntBASIC17.96■□□□□ 0.47
Nip7Q9CXK8 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC17.96■□□□□ 0.47
Nip7Q9CXK8 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nip7Q9CXK8 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nip7Q9CXK8 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nip7Q9CXK8 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nip7Q9CXK8 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nip7Q9CXK8 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Nip7Q9CXK8 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nip7Q9CXK8 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Nip7Q9CXK8 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms