Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Gm11860-201ENSMUST00000122346 1010 ntBASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Gm37055-201ENSMUST00000191866 133 ntBASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
RTRAFQ9CQE8 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Gm20472-201ENSMUST00000174403 1240 ntBASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Gm7889-201ENSMUST00000185591 958 ntBASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 CT009510.1-201ENSMUST00000227972 270 ntBASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC11.79□□□□□ -0.52
RTRAFQ9CQE8 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Mir770-201ENSMUST00000103252 94 ntBASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Gm22240-201ENSMUST00000175225 82 ntBASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Krtap5-1-202ENSMUST00000188274 742 ntBASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Gm9172-201ENSMUST00000212092 954 ntBASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Gm38197-201ENSMUST00000192320 2122 ntBASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
RTRAFQ9CQE8 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms