Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim11Q99PQ2 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim11Q99PQ2 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim11Q99PQ2 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim11Q99PQ2 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Trim11Q99PQ2 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim11Q99PQ2 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.54■□□□□ 0.24
Trim11Q99PQ2 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim11Q99PQ2 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim11Q99PQ2 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trim11Q99PQ2 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Trim11Q99PQ2 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Trim11Q99PQ2 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.54■□□□□ 0.24
Trim11Q99PQ2 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC16.54■□□□□ 0.24
Trim11Q99PQ2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim11Q99PQ2 Gm45098-201ENSMUST00000207179 657 ntBASIC16.54■□□□□ 0.24
Trim11Q99PQ2 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Trim11Q99PQ2 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim11Q99PQ2 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim11Q99PQ2 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim11Q99PQ2 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.54■□□□□ 0.24
Trim11Q99PQ2 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim11Q99PQ2 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim11Q99PQ2 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim11Q99PQ2 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.54■□□□□ 0.24
Trim11Q99PQ2 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.54■□□□□ 0.24
Trim11Q99PQ2 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.54■□□□□ 0.24
Trim11Q99PQ2 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trim11Q99PQ2 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim11Q99PQ2 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim11Q99PQ2 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim11Q99PQ2 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim11Q99PQ2 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trim11Q99PQ2 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim11Q99PQ2 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim11Q99PQ2 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim11Q99PQ2 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim11Q99PQ2 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim11Q99PQ2 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim11Q99PQ2 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.53■□□□□ 0.24
Trim11Q99PQ2 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.53■□□□□ 0.24
Trim11Q99PQ2 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim11Q99PQ2 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trim11Q99PQ2 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim11Q99PQ2 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim11Q99PQ2 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.53■□□□□ 0.24
Trim11Q99PQ2 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim11Q99PQ2 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim11Q99PQ2 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim11Q99PQ2 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim11Q99PQ2 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim11Q99PQ2 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim11Q99PQ2 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim11Q99PQ2 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trim11Q99PQ2 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Trim11Q99PQ2 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim11Q99PQ2 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC16.53■□□□□ 0.24
Trim11Q99PQ2 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Trim11Q99PQ2 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim11Q99PQ2 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trim11Q99PQ2 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
Trim11Q99PQ2 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Trim11Q99PQ2 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim11Q99PQ2 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trim11Q99PQ2 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim11Q99PQ2 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim11Q99PQ2 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim11Q99PQ2 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim11Q99PQ2 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim11Q99PQ2 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim11Q99PQ2 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim11Q99PQ2 Mir8117-201ENSMUST00000184773 107 ntBASIC16.52■□□□□ 0.24
Trim11Q99PQ2 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC16.52■□□□□ 0.24
Trim11Q99PQ2 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Trim11Q99PQ2 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC16.52■□□□□ 0.24
Trim11Q99PQ2 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trim11Q99PQ2 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.52■□□□□ 0.24
Trim11Q99PQ2 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim11Q99PQ2 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trim11Q99PQ2 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim11Q99PQ2 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Trim11Q99PQ2 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim11Q99PQ2 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.52■□□□□ 0.23
Trim11Q99PQ2 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.52■□□□□ 0.23
Trim11Q99PQ2 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim11Q99PQ2 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim11Q99PQ2 Gm9252-201ENSMUST00000172364 1602 ntBASIC16.52■□□□□ 0.23
Trim11Q99PQ2 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim11Q99PQ2 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim11Q99PQ2 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trim11Q99PQ2 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
Trim11Q99PQ2 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trim11Q99PQ2 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim11Q99PQ2 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim11Q99PQ2 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
Trim11Q99PQ2 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim11Q99PQ2 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim11Q99PQ2 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trim11Q99PQ2 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trim11Q99PQ2 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms