Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim16Q99PP9 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim16Q99PP9 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim16Q99PP9 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim16Q99PP9 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim16Q99PP9 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim16Q99PP9 Gm12008-201ENSMUST00000117791 755 ntBASIC14.21□□□□□ -0.13
Trim16Q99PP9 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim16Q99PP9 Gm15467-201ENSMUST00000120582 445 ntBASIC14.21□□□□□ -0.13
Trim16Q99PP9 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim16Q99PP9 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.21□□□□□ -0.13
Trim16Q99PP9 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim16Q99PP9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trim16Q99PP9 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim16Q99PP9 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.21□□□□□ -0.13
Trim16Q99PP9 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.21□□□□□ -0.13
Trim16Q99PP9 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim16Q99PP9 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim16Q99PP9 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim16Q99PP9 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim16Q99PP9 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim16Q99PP9 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.21□□□□□ -0.13
Trim16Q99PP9 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trim16Q99PP9 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim16Q99PP9 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim16Q99PP9 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim16Q99PP9 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trim16Q99PP9 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim16Q99PP9 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim16Q99PP9 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trim16Q99PP9 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Trim16Q99PP9 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim16Q99PP9 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim16Q99PP9 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim16Q99PP9 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim16Q99PP9 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim16Q99PP9 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim16Q99PP9 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim16Q99PP9 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim16Q99PP9 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim16Q99PP9 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trim16Q99PP9 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.2□□□□□ -0.14
Trim16Q99PP9 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trim16Q99PP9 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim16Q99PP9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim16Q99PP9 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim16Q99PP9 Gm17968-201ENSMUST00000194902 784 ntBASIC14.2□□□□□ -0.14
Trim16Q99PP9 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trim16Q99PP9 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim16Q99PP9 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim16Q99PP9 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim16Q99PP9 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim16Q99PP9 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim16Q99PP9 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim16Q99PP9 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim16Q99PP9 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim16Q99PP9 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim16Q99PP9 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim16Q99PP9 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trim16Q99PP9 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim16Q99PP9 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim16Q99PP9 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim16Q99PP9 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim16Q99PP9 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.2□□□□□ -0.14
Trim16Q99PP9 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim16Q99PP9 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim16Q99PP9 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim16Q99PP9 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim16Q99PP9 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim16Q99PP9 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim16Q99PP9 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim16Q99PP9 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim16Q99PP9 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim16Q99PP9 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim16Q99PP9 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim16Q99PP9 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim16Q99PP9 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim16Q99PP9 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim16Q99PP9 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim16Q99PP9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim16Q99PP9 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Trim16Q99PP9 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim16Q99PP9 Gm14494-201ENSMUST00000118786 435 ntBASIC14.19□□□□□ -0.14
Trim16Q99PP9 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim16Q99PP9 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim16Q99PP9 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim16Q99PP9 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim16Q99PP9 Gm5177-201ENSMUST00000183092 997 ntBASIC14.19□□□□□ -0.14
Trim16Q99PP9 Gm8000-201ENSMUST00000188378 592 ntBASIC14.19□□□□□ -0.14
Trim16Q99PP9 Gm5264-201ENSMUST00000190584 848 ntBASIC14.19□□□□□ -0.14
Trim16Q99PP9 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim16Q99PP9 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.19□□□□□ -0.14
Trim16Q99PP9 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.19□□□□□ -0.14
Trim16Q99PP9 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim16Q99PP9 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim16Q99PP9 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim16Q99PP9 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim16Q99PP9 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim16Q99PP9 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trim16Q99PP9 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms