Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Chmp1b1Q99LU0 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp1b1Q99LU0 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.73□□□□□ -0.21
Chmp1b1Q99LU0 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp1b1Q99LU0 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.73□□□□□ -0.21
Chmp1b1Q99LU0 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp1b1Q99LU0 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Chmp1b1Q99LU0 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp1b1Q99LU0 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp1b1Q99LU0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.73□□□□□ -0.21
Chmp1b1Q99LU0 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.73□□□□□ -0.21
Chmp1b1Q99LU0 Gm27525-201ENSMUST00000184465 107 ntBASIC13.73□□□□□ -0.21
Chmp1b1Q99LU0 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.73□□□□□ -0.21
Chmp1b1Q99LU0 Gm5264-201ENSMUST00000190584 848 ntBASIC13.73□□□□□ -0.21
Chmp1b1Q99LU0 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.73□□□□□ -0.21
Chmp1b1Q99LU0 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp1b1Q99LU0 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp1b1Q99LU0 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp1b1Q99LU0 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Chmp1b1Q99LU0 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Chmp1b1Q99LU0 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp1b1Q99LU0 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp1b1Q99LU0 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Chmp1b1Q99LU0 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.73□□□□□ -0.21
Chmp1b1Q99LU0 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp1b1Q99LU0 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp1b1Q99LU0 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp1b1Q99LU0 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp1b1Q99LU0 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Chmp1b1Q99LU0 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp1b1Q99LU0 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Chmp1b1Q99LU0 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp1b1Q99LU0 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp1b1Q99LU0 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp1b1Q99LU0 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp1b1Q99LU0 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Chmp1b1Q99LU0 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Chmp1b1Q99LU0 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp1b1Q99LU0 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp1b1Q99LU0 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Chmp1b1Q99LU0 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp1b1Q99LU0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp1b1Q99LU0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Chmp1b1Q99LU0 Gm9727-201ENSMUST00000161387 555 ntBASIC13.72□□□□□ -0.21
Chmp1b1Q99LU0 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Chmp1b1Q99LU0 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.72□□□□□ -0.21
Chmp1b1Q99LU0 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.72□□□□□ -0.21
Chmp1b1Q99LU0 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp1b1Q99LU0 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp1b1Q99LU0 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp1b1Q99LU0 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp1b1Q99LU0 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Chmp1b1Q99LU0 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp1b1Q99LU0 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp1b1Q99LU0 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp1b1Q99LU0 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp1b1Q99LU0 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Chmp1b1Q99LU0 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp1b1Q99LU0 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp1b1Q99LU0 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp1b1Q99LU0 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Chmp1b1Q99LU0 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Chmp1b1Q99LU0 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Chmp1b1Q99LU0 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms