Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RtcbQ99LF4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.79■□□□□ 0.44
RtcbQ99LF4 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RtcbQ99LF4 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RtcbQ99LF4 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC17.79■□□□□ 0.44
RtcbQ99LF4 Gm17420-201ENSMUST00000164753 153 ntBASIC17.79■□□□□ 0.44
RtcbQ99LF4 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC17.79■□□□□ 0.44
RtcbQ99LF4 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RtcbQ99LF4 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RtcbQ99LF4 AC125117.1-201ENSMUST00000228121 468 ntBASIC17.79■□□□□ 0.44
RtcbQ99LF4 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RtcbQ99LF4 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RtcbQ99LF4 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RtcbQ99LF4 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RtcbQ99LF4 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RtcbQ99LF4 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RtcbQ99LF4 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RtcbQ99LF4 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RtcbQ99LF4 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RtcbQ99LF4 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RtcbQ99LF4 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RtcbQ99LF4 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RtcbQ99LF4 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RtcbQ99LF4 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RtcbQ99LF4 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RtcbQ99LF4 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
RtcbQ99LF4 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RtcbQ99LF4 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RtcbQ99LF4 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
RtcbQ99LF4 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RtcbQ99LF4 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RtcbQ99LF4 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RtcbQ99LF4 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
RtcbQ99LF4 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RtcbQ99LF4 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RtcbQ99LF4 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RtcbQ99LF4 Gm37424-201ENSMUST00000191727 561 ntBASIC17.78■□□□□ 0.44
RtcbQ99LF4 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RtcbQ99LF4 Gm8463-201ENSMUST00000208573 613 ntBASIC17.78■□□□□ 0.44
RtcbQ99LF4 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RtcbQ99LF4 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC17.78■□□□□ 0.44
RtcbQ99LF4 AC140451.2-201ENSMUST00000228030 664 ntBASIC17.78■□□□□ 0.44
RtcbQ99LF4 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC17.78■□□□□ 0.44
RtcbQ99LF4 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RtcbQ99LF4 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC17.78■□□□□ 0.44
RtcbQ99LF4 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RtcbQ99LF4 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RtcbQ99LF4 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
RtcbQ99LF4 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RtcbQ99LF4 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RtcbQ99LF4 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RtcbQ99LF4 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RtcbQ99LF4 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC17.77■□□□□ 0.44
RtcbQ99LF4 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RtcbQ99LF4 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RtcbQ99LF4 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RtcbQ99LF4 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RtcbQ99LF4 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC17.77■□□□□ 0.44
RtcbQ99LF4 Gm11814-201ENSMUST00000119515 929 ntBASIC17.77■□□□□ 0.44
RtcbQ99LF4 Gm14660-201ENSMUST00000119809 575 ntBASIC17.77■□□□□ 0.44
RtcbQ99LF4 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC17.77■□□□□ 0.44
RtcbQ99LF4 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC17.77■□□□□ 0.44
RtcbQ99LF4 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC17.77■□□□□ 0.44
RtcbQ99LF4 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
RtcbQ99LF4 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RtcbQ99LF4 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
RtcbQ99LF4 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RtcbQ99LF4 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RtcbQ99LF4 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
RtcbQ99LF4 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
RtcbQ99LF4 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RtcbQ99LF4 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RtcbQ99LF4 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RtcbQ99LF4 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.76■□□□□ 0.43
RtcbQ99LF4 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RtcbQ99LF4 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RtcbQ99LF4 Gm43352-201ENSMUST00000196419 3065 ntBASIC17.76■□□□□ 0.43
RtcbQ99LF4 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RtcbQ99LF4 Gm42901-201ENSMUST00000197735 3171 ntBASIC17.76■□□□□ 0.43
RtcbQ99LF4 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RtcbQ99LF4 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RtcbQ99LF4 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.76■□□□□ 0.43
RtcbQ99LF4 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RtcbQ99LF4 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RtcbQ99LF4 Gm15240-201ENSMUST00000118156 720 ntBASIC17.76■□□□□ 0.43
RtcbQ99LF4 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC17.76■□□□□ 0.43
RtcbQ99LF4 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RtcbQ99LF4 Gm9728-201ENSMUST00000200197 1055 ntBASIC17.76■□□□□ 0.43
RtcbQ99LF4 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RtcbQ99LF4 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RtcbQ99LF4 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RtcbQ99LF4 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RtcbQ99LF4 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RtcbQ99LF4 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RtcbQ99LF4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RtcbQ99LF4 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RtcbQ99LF4 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RtcbQ99LF4 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RtcbQ99LF4 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RtcbQ99LF4 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms