Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.1■□□□□ 0.01
Pcdhb1Q91Y08 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Gm12017-201ENSMUST00000122453 1003 ntBASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Gm18737-201ENSMUST00000173594 937 ntBASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pcdhb1Q91Y08 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb1Q91Y08 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.08■□□□□ 0.01
Pcdhb1Q91Y08 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb1Q91Y08 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb1Q91Y08 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb1Q91Y08 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb1Q91Y08 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb1Q91Y08 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.08■□□□□ 0.01
Pcdhb1Q91Y08 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdhb1Q91Y08 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.08■□□□□ 0
Pcdhb1Q91Y08 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Pcdhb1Q91Y08 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb1Q91Y08 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb1Q91Y08 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb1Q91Y08 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Pcdhb1Q91Y08 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb1Q91Y08 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb1Q91Y08 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb1Q91Y08 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.08■□□□□ 0
Pcdhb1Q91Y08 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Pcdhb1Q91Y08 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb1Q91Y08 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC15.08■□□□□ 0
Pcdhb1Q91Y08 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.08■□□□□ 0
Pcdhb1Q91Y08 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb1Q91Y08 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb1Q91Y08 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.08■□□□□ 0
Pcdhb1Q91Y08 Gm37935-201ENSMUST00000192012 982 ntBASIC15.08■□□□□ 0
Pcdhb1Q91Y08 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC15.08■□□□□ 0
Pcdhb1Q91Y08 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb1Q91Y08 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.08■□□□□ 0
Pcdhb1Q91Y08 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb1Q91Y08 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb1Q91Y08 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.08■□□□□ 0
Pcdhb1Q91Y08 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb1Q91Y08 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb1Q91Y08 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Pcdhb1Q91Y08 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb1Q91Y08 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Pcdhb1Q91Y08 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdhb1Q91Y08 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.07■□□□□ 0
Pcdhb1Q91Y08 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb1Q91Y08 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Pcdhb1Q91Y08 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Pcdhb1Q91Y08 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb1Q91Y08 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.07■□□□□ 0
Pcdhb1Q91Y08 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb1Q91Y08 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb1Q91Y08 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb1Q91Y08 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.07■□□□□ 0
Pcdhb1Q91Y08 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb1Q91Y08 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb1Q91Y08 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.07■□□□□ 0
Pcdhb1Q91Y08 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.07■□□□□ 0
Pcdhb1Q91Y08 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC15.07■□□□□ 0
Pcdhb1Q91Y08 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.07■□□□□ 0
Pcdhb1Q91Y08 Gm18057-201ENSMUST00000208220 503 ntBASIC15.07■□□□□ 0
Pcdhb1Q91Y08 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb1Q91Y08 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.07■□□□□ 0
Pcdhb1Q91Y08 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.07■□□□□ 0
Pcdhb1Q91Y08 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms