Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb22Q91XZ8 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb22Q91XZ8 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb22Q91XZ8 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb22Q91XZ8 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Pcdhb22Q91XZ8 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Pcdhb22Q91XZ8 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdhb22Q91XZ8 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb22Q91XZ8 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb22Q91XZ8 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb22Q91XZ8 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb22Q91XZ8 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb22Q91XZ8 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb22Q91XZ8 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Pcdhb22Q91XZ8 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb22Q91XZ8 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Pcdhb22Q91XZ8 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb22Q91XZ8 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb22Q91XZ8 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.92■□□□□ 0.3
Pcdhb22Q91XZ8 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb22Q91XZ8 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb22Q91XZ8 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb22Q91XZ8 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb22Q91XZ8 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb22Q91XZ8 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb22Q91XZ8 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb22Q91XZ8 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb22Q91XZ8 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Pcdhb22Q91XZ8 Gm13823-201ENSMUST00000119930 345 ntBASIC16.92■□□□□ 0.3
Pcdhb22Q91XZ8 Gm15693-201ENSMUST00000120470 637 ntBASIC16.92■□□□□ 0.3
Pcdhb22Q91XZ8 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Pcdhb22Q91XZ8 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb22Q91XZ8 Gm18766-201ENSMUST00000189811 808 ntBASIC16.92■□□□□ 0.3
Pcdhb22Q91XZ8 Gm7774-201ENSMUST00000200064 533 ntBASIC16.92■□□□□ 0.3
Pcdhb22Q91XZ8 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC16.92■□□□□ 0.3
Pcdhb22Q91XZ8 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.92■□□□□ 0.3
Pcdhb22Q91XZ8 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb22Q91XZ8 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb22Q91XZ8 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb22Q91XZ8 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb22Q91XZ8 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb22Q91XZ8 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Pcdhb22Q91XZ8 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
Pcdhb22Q91XZ8 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb22Q91XZ8 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb22Q91XZ8 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb22Q91XZ8 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb22Q91XZ8 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb22Q91XZ8 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb22Q91XZ8 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb22Q91XZ8 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb22Q91XZ8 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Pcdhb22Q91XZ8 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Pcdhb22Q91XZ8 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.91■□□□□ 0.3
Pcdhb22Q91XZ8 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb22Q91XZ8 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb22Q91XZ8 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb22Q91XZ8 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Pcdhb22Q91XZ8 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.91■□□□□ 0.3
Pcdhb22Q91XZ8 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb22Q91XZ8 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Pcdhb22Q91XZ8 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb22Q91XZ8 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb22Q91XZ8 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb22Q91XZ8 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb22Q91XZ8 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb22Q91XZ8 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
Pcdhb22Q91XZ8 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb22Q91XZ8 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb22Q91XZ8 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb22Q91XZ8 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pcdhb22Q91XZ8 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb22Q91XZ8 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Pcdhb22Q91XZ8 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Pcdhb22Q91XZ8 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdhb22Q91XZ8 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb22Q91XZ8 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb22Q91XZ8 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb22Q91XZ8 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb22Q91XZ8 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb22Q91XZ8 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Pcdhb22Q91XZ8 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC16.9■□□□□ 0.3
Pcdhb22Q91XZ8 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.9■□□□□ 0.3
Pcdhb22Q91XZ8 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.9■□□□□ 0.3
Pcdhb22Q91XZ8 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb22Q91XZ8 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb22Q91XZ8 Gm5779-201ENSMUST00000218467 910 ntBASIC16.9■□□□□ 0.3
Pcdhb22Q91XZ8 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.9■□□□□ 0.3
Pcdhb22Q91XZ8 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb22Q91XZ8 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Pcdhb22Q91XZ8 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb22Q91XZ8 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.9■□□□□ 0.3
Pcdhb22Q91XZ8 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb22Q91XZ8 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb22Q91XZ8 Gm5763-201ENSMUST00000155951 1530 ntBASIC16.9■□□□□ 0.3
Pcdhb22Q91XZ8 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb22Q91XZ8 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pcdhb22Q91XZ8 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Pcdhb22Q91XZ8 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Pcdhb22Q91XZ8 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms