Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.2□□□□□ -0.14
Pcdhb8Q91XZ2 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.2□□□□□ -0.14
Pcdhb8Q91XZ2 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.2□□□□□ -0.14
Pcdhb8Q91XZ2 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb8Q91XZ2 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb8Q91XZ2 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb8Q91XZ2 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb8Q91XZ2 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhb8Q91XZ2 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.2□□□□□ -0.14
Pcdhb8Q91XZ2 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.2□□□□□ -0.14
Pcdhb8Q91XZ2 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb8Q91XZ2 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb8Q91XZ2 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb8Q91XZ2 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb8Q91XZ2 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb8Q91XZ2 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.2□□□□□ -0.14
Pcdhb8Q91XZ2 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb8Q91XZ2 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb8Q91XZ2 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb8Q91XZ2 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Pcdhb8Q91XZ2 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb8Q91XZ2 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.2□□□□□ -0.14
Pcdhb8Q91XZ2 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pcdhb8Q91XZ2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb8Q91XZ2 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb8Q91XZ2 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Pcdhb8Q91XZ2 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb8Q91XZ2 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb8Q91XZ2 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb8Q91XZ2 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhb8Q91XZ2 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb8Q91XZ2 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Pcdhb8Q91XZ2 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb8Q91XZ2 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb8Q91XZ2 Olfr286-202ENSMUST00000205305 969 ntBASIC14.19□□□□□ -0.14
Pcdhb8Q91XZ2 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.19□□□□□ -0.14
Pcdhb8Q91XZ2 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb8Q91XZ2 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhb8Q91XZ2 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb8Q91XZ2 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb8Q91XZ2 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhb8Q91XZ2 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhb8Q91XZ2 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhb8Q91XZ2 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.19□□□□□ -0.14
Pcdhb8Q91XZ2 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb8Q91XZ2 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb8Q91XZ2 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Pcdhb8Q91XZ2 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb8Q91XZ2 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb8Q91XZ2 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb8Q91XZ2 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb8Q91XZ2 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb8Q91XZ2 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb8Q91XZ2 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 Gm12260-201ENSMUST00000122447 411 ntBASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb8Q91XZ2 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdhb8Q91XZ2 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb8Q91XZ2 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb8Q91XZ2 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb8Q91XZ2 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdhb8Q91XZ2 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb8Q91XZ2 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb8Q91XZ2 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb8Q91XZ2 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.17□□□□□ -0.14
Pcdhb8Q91XZ2 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Pcdhb8Q91XZ2 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdhb8Q91XZ2 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb8Q91XZ2 Gm44492-201ENSMUST00000197012 141 ntBASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms