Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdhga4Q91XY4 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga4Q91XY4 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
Pcdhga4Q91XY4 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga4Q91XY4 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pcdhga4Q91XY4 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga4Q91XY4 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga4Q91XY4 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga4Q91XY4 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga4Q91XY4 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga4Q91XY4 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pcdhga4Q91XY4 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga4Q91XY4 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga4Q91XY4 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga4Q91XY4 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga4Q91XY4 Gm11543-201ENSMUST00000120758 370 ntBASIC14.31□□□□□ -0.12
Pcdhga4Q91XY4 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pcdhga4Q91XY4 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.31□□□□□ -0.12
Pcdhga4Q91XY4 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Pcdhga4Q91XY4 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga4Q91XY4 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga4Q91XY4 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.31□□□□□ -0.12
Pcdhga4Q91XY4 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga4Q91XY4 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga4Q91XY4 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga4Q91XY4 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga4Q91XY4 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga4Q91XY4 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdhga4Q91XY4 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Gm18057-201ENSMUST00000208220 503 ntBASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Gm8396-201ENSMUST00000057361 823 ntBASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Gm38391-201ENSMUST00000191720 4069 ntBASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Efs-202ENSMUST00000227037 2540 ntBASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdhga4Q91XY4 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga4Q91XY4 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga4Q91XY4 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga4Q91XY4 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.29□□□□□ -0.12
Pcdhga4Q91XY4 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga4Q91XY4 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Pcdhga4Q91XY4 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga4Q91XY4 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga4Q91XY4 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Pcdhga4Q91XY4 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga4Q91XY4 Gm9385-201ENSMUST00000117563 472 ntBASIC14.29□□□□□ -0.12
Pcdhga4Q91XY4 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga4Q91XY4 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.29□□□□□ -0.12
Pcdhga4Q91XY4 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdhga4Q91XY4 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.29□□□□□ -0.12
Pcdhga4Q91XY4 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga4Q91XY4 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.29□□□□□ -0.12
Pcdhga4Q91XY4 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.29□□□□□ -0.12
Pcdhga4Q91XY4 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga4Q91XY4 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.29□□□□□ -0.12
Pcdhga4Q91XY4 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdhga4Q91XY4 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms