Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trex1Q91XB0 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trex1Q91XB0 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trex1Q91XB0 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Trex1Q91XB0 Gm15393-201ENSMUST00000120499 219 ntBASIC16.58■□□□□ 0.24
Trex1Q91XB0 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trex1Q91XB0 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC16.58■□□□□ 0.24
Trex1Q91XB0 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.58■□□□□ 0.24
Trex1Q91XB0 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.58■□□□□ 0.24
Trex1Q91XB0 Gm37917-201ENSMUST00000194711 392 ntBASIC16.58■□□□□ 0.24
Trex1Q91XB0 Gm18018-201ENSMUST00000198273 408 ntBASIC16.58■□□□□ 0.24
Trex1Q91XB0 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC16.58■□□□□ 0.24
Trex1Q91XB0 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.58■□□□□ 0.24
Trex1Q91XB0 Gm45668-201ENSMUST00000211271 493 ntBASIC16.58■□□□□ 0.24
Trex1Q91XB0 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16.58■□□□□ 0.24
Trex1Q91XB0 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trex1Q91XB0 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trex1Q91XB0 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trex1Q91XB0 Gm15163-201ENSMUST00000120749 1302 ntBASIC16.58■□□□□ 0.24
Trex1Q91XB0 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trex1Q91XB0 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16.58■□□□□ 0.24
Trex1Q91XB0 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trex1Q91XB0 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trex1Q91XB0 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trex1Q91XB0 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trex1Q91XB0 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trex1Q91XB0 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trex1Q91XB0 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trex1Q91XB0 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trex1Q91XB0 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trex1Q91XB0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trex1Q91XB0 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trex1Q91XB0 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trex1Q91XB0 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trex1Q91XB0 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trex1Q91XB0 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trex1Q91XB0 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trex1Q91XB0 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trex1Q91XB0 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC16.57■□□□□ 0.24
Trex1Q91XB0 Gm12091-201ENSMUST00000146791 830 ntBASIC16.57■□□□□ 0.24
Trex1Q91XB0 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trex1Q91XB0 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC16.57■□□□□ 0.24
Trex1Q91XB0 Gm9908-201ENSMUST00000211534 448 ntBASIC16.57■□□□□ 0.24
Trex1Q91XB0 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC16.57■□□□□ 0.24
Trex1Q91XB0 Gm15823-201ENSMUST00000064305 670 ntBASIC16.57■□□□□ 0.24
Trex1Q91XB0 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trex1Q91XB0 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trex1Q91XB0 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trex1Q91XB0 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trex1Q91XB0 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trex1Q91XB0 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trex1Q91XB0 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trex1Q91XB0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trex1Q91XB0 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trex1Q91XB0 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Trex1Q91XB0 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trex1Q91XB0 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trex1Q91XB0 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trex1Q91XB0 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trex1Q91XB0 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Trex1Q91XB0 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trex1Q91XB0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trex1Q91XB0 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Trex1Q91XB0 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC16.56■□□□□ 0.24
Trex1Q91XB0 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trex1Q91XB0 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trex1Q91XB0 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trex1Q91XB0 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trex1Q91XB0 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC16.56■□□□□ 0.24
Trex1Q91XB0 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trex1Q91XB0 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trex1Q91XB0 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trex1Q91XB0 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trex1Q91XB0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trex1Q91XB0 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trex1Q91XB0 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trex1Q91XB0 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trex1Q91XB0 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trex1Q91XB0 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.55■□□□□ 0.24
Trex1Q91XB0 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Trex1Q91XB0 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trex1Q91XB0 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trex1Q91XB0 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trex1Q91XB0 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trex1Q91XB0 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.55■□□□□ 0.24
Trex1Q91XB0 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
Trex1Q91XB0 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC16.55■□□□□ 0.24
Trex1Q91XB0 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.55■□□□□ 0.24
Trex1Q91XB0 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.55■□□□□ 0.24
Trex1Q91XB0 AC132467.2-202ENSMUST00000227726 559 ntBASIC16.55■□□□□ 0.24
Trex1Q91XB0 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
Trex1Q91XB0 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trex1Q91XB0 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trex1Q91XB0 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trex1Q91XB0 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trex1Q91XB0 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trex1Q91XB0 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trex1Q91XB0 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trex1Q91XB0 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trex1Q91XB0 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms