Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H1fooQ8VIK3 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.17□□□□□ -0.46
H1fooQ8VIK3 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
H1fooQ8VIK3 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
H1fooQ8VIK3 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
H1fooQ8VIK3 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
H1fooQ8VIK3 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
H1fooQ8VIK3 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H1fooQ8VIK3 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC12.16□□□□□ -0.46
H1fooQ8VIK3 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC12.16□□□□□ -0.46
H1fooQ8VIK3 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H1fooQ8VIK3 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.16□□□□□ -0.46
H1fooQ8VIK3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
H1fooQ8VIK3 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
H1fooQ8VIK3 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H1fooQ8VIK3 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
H1fooQ8VIK3 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
H1fooQ8VIK3 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.16□□□□□ -0.46
H1fooQ8VIK3 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
H1fooQ8VIK3 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
H1fooQ8VIK3 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC12.16□□□□□ -0.46
H1fooQ8VIK3 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H1fooQ8VIK3 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H1fooQ8VIK3 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.16□□□□□ -0.46
H1fooQ8VIK3 Gm27301-201ENSMUST00000184012 127 ntBASIC12.16□□□□□ -0.46
H1fooQ8VIK3 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
H1fooQ8VIK3 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.16□□□□□ -0.46
H1fooQ8VIK3 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
H1fooQ8VIK3 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H1fooQ8VIK3 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
H1fooQ8VIK3 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
H1fooQ8VIK3 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.16□□□□□ -0.46
H1fooQ8VIK3 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H1fooQ8VIK3 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
H1fooQ8VIK3 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H1fooQ8VIK3 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
H1fooQ8VIK3 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
H1fooQ8VIK3 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H1fooQ8VIK3 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
H1fooQ8VIK3 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.16□□□□□ -0.46
H1fooQ8VIK3 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Gm1401-201ENSMUST00000122048 772 ntBASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Gm7229-201ENSMUST00000214719 1007 ntBASIC12.15□□□□□ -0.46
H1fooQ8VIK3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
H1fooQ8VIK3 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
H1fooQ8VIK3 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
H1fooQ8VIK3 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
H1fooQ8VIK3 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
H1fooQ8VIK3 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.47
H1fooQ8VIK3 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
H1fooQ8VIK3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
H1fooQ8VIK3 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms