Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim60Q8VI40 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim60Q8VI40 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim60Q8VI40 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim60Q8VI40 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.03■□□□□ -0
Trim60Q8VI40 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.03■□□□□ -0
Trim60Q8VI40 Gm2451-201ENSMUST00000199447 999 ntBASIC15.03■□□□□ -0
Trim60Q8VI40 Gm10290-201ENSMUST00000200451 999 ntBASIC15.03■□□□□ -0
Trim60Q8VI40 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.03■□□□□ -0
Trim60Q8VI40 Gm9182-201ENSMUST00000217829 639 ntBASIC15.03■□□□□ -0
Trim60Q8VI40 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC15.03■□□□□ -0
Trim60Q8VI40 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim60Q8VI40 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim60Q8VI40 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim60Q8VI40 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim60Q8VI40 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trim60Q8VI40 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim60Q8VI40 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trim60Q8VI40 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim60Q8VI40 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC15.03■□□□□ -0
Trim60Q8VI40 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trim60Q8VI40 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim60Q8VI40 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trim60Q8VI40 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trim60Q8VI40 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
Trim60Q8VI40 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim60Q8VI40 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim60Q8VI40 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim60Q8VI40 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim60Q8VI40 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trim60Q8VI40 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.02■□□□□ -0
Trim60Q8VI40 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trim60Q8VI40 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trim60Q8VI40 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.02■□□□□ -0
Trim60Q8VI40 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim60Q8VI40 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.02■□□□□ -0
Trim60Q8VI40 Gm11452-201ENSMUST00000122376 690 ntBASIC15.02■□□□□ -0
Trim60Q8VI40 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim60Q8VI40 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trim60Q8VI40 Olfr286-202ENSMUST00000205305 969 ntBASIC15.02■□□□□ -0
Trim60Q8VI40 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC15.02■□□□□ -0
Trim60Q8VI40 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.02□□□□□ -0.01
Trim60Q8VI40 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim60Q8VI40 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trim60Q8VI40 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim60Q8VI40 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim60Q8VI40 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC15.02□□□□□ -0.01
Trim60Q8VI40 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim60Q8VI40 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim60Q8VI40 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trim60Q8VI40 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim60Q8VI40 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim60Q8VI40 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trim60Q8VI40 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trim60Q8VI40 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim60Q8VI40 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trim60Q8VI40 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim60Q8VI40 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim60Q8VI40 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim60Q8VI40 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim60Q8VI40 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim60Q8VI40 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim60Q8VI40 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim60Q8VI40 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim60Q8VI40 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.01□□□□□ -0.01
Trim60Q8VI40 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.01□□□□□ -0.01
Trim60Q8VI40 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim60Q8VI40 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim60Q8VI40 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim60Q8VI40 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim60Q8VI40 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim60Q8VI40 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim60Q8VI40 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim60Q8VI40 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim60Q8VI40 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim60Q8VI40 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC15.01□□□□□ -0.01
Trim60Q8VI40 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim60Q8VI40 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Trim60Q8VI40 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim60Q8VI40 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim60Q8VI40 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim60Q8VI40 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim60Q8VI40 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim60Q8VI40 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim60Q8VI40 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim60Q8VI40 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim60Q8VI40 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15□□□□□ -0.01
Trim60Q8VI40 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim60Q8VI40 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim60Q8VI40 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim60Q8VI40 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim60Q8VI40 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trim60Q8VI40 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC15□□□□□ -0.01
Trim60Q8VI40 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim60Q8VI40 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim60Q8VI40 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim60Q8VI40 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim60Q8VI40 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15□□□□□ -0.01
Trim60Q8VI40 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trim60Q8VI40 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms