Protein–RNA interactions for Protein: Q8VEK3

Hnrnpu, Heterogeneous nuclear ribonucleoprotein U, mousemouse

Known RBP Predictions only

Length 800 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HnrnpuQ8VEK3 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HnrnpuQ8VEK3 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HnrnpuQ8VEK3 Gm10676-201ENSMUST00000098778 3221 ntBASIC18.07■□□□□ 0.48
HnrnpuQ8VEK3 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HnrnpuQ8VEK3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HnrnpuQ8VEK3 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HnrnpuQ8VEK3 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HnrnpuQ8VEK3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HnrnpuQ8VEK3 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HnrnpuQ8VEK3 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HnrnpuQ8VEK3 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
HnrnpuQ8VEK3 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HnrnpuQ8VEK3 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HnrnpuQ8VEK3 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HnrnpuQ8VEK3 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HnrnpuQ8VEK3 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
HnrnpuQ8VEK3 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HnrnpuQ8VEK3 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
HnrnpuQ8VEK3 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
HnrnpuQ8VEK3 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
HnrnpuQ8VEK3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HnrnpuQ8VEK3 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC18.06■□□□□ 0.48
HnrnpuQ8VEK3 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
HnrnpuQ8VEK3 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HnrnpuQ8VEK3 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HnrnpuQ8VEK3 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC18.06■□□□□ 0.48
HnrnpuQ8VEK3 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HnrnpuQ8VEK3 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC18.06■□□□□ 0.48
HnrnpuQ8VEK3 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC18.06■□□□□ 0.48
HnrnpuQ8VEK3 Gm12017-201ENSMUST00000122453 1003 ntBASIC18.06■□□□□ 0.48
HnrnpuQ8VEK3 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
HnrnpuQ8VEK3 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
HnrnpuQ8VEK3 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HnrnpuQ8VEK3 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.06■□□□□ 0.48
HnrnpuQ8VEK3 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HnrnpuQ8VEK3 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HnrnpuQ8VEK3 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HnrnpuQ8VEK3 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
HnrnpuQ8VEK3 Nrn1-204ENSMUST00000224323 1779 ntBASIC18.06■□□□□ 0.48
HnrnpuQ8VEK3 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HnrnpuQ8VEK3 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HnrnpuQ8VEK3 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HnrnpuQ8VEK3 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HnrnpuQ8VEK3 Gm43205-201ENSMUST00000198622 1968 ntBASIC18.06■□□□□ 0.48
HnrnpuQ8VEK3 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HnrnpuQ8VEK3 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HnrnpuQ8VEK3 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HnrnpuQ8VEK3 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HnrnpuQ8VEK3 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
HnrnpuQ8VEK3 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HnrnpuQ8VEK3 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HnrnpuQ8VEK3 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.05■□□□□ 0.48
HnrnpuQ8VEK3 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HnrnpuQ8VEK3 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HnrnpuQ8VEK3 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HnrnpuQ8VEK3 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC18.05■□□□□ 0.48
HnrnpuQ8VEK3 Gm4913-201ENSMUST00000117075 1290 ntBASIC18.05■□□□□ 0.48
HnrnpuQ8VEK3 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HnrnpuQ8VEK3 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HnrnpuQ8VEK3 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HnrnpuQ8VEK3 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.05■□□□□ 0.48
HnrnpuQ8VEK3 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.05■□□□□ 0.48
HnrnpuQ8VEK3 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HnrnpuQ8VEK3 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HnrnpuQ8VEK3 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HnrnpuQ8VEK3 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HnrnpuQ8VEK3 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HnrnpuQ8VEK3 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC18.05■□□□□ 0.48
HnrnpuQ8VEK3 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HnrnpuQ8VEK3 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
HnrnpuQ8VEK3 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HnrnpuQ8VEK3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
HnrnpuQ8VEK3 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HnrnpuQ8VEK3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC18.05■□□□□ 0.48
HnrnpuQ8VEK3 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC18.04■□□□□ 0.48
HnrnpuQ8VEK3 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC18.04■□□□□ 0.48
HnrnpuQ8VEK3 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HnrnpuQ8VEK3 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HnrnpuQ8VEK3 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HnrnpuQ8VEK3 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HnrnpuQ8VEK3 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
HnrnpuQ8VEK3 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HnrnpuQ8VEK3 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC18.04■□□□□ 0.48
HnrnpuQ8VEK3 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HnrnpuQ8VEK3 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC18.04■□□□□ 0.48
HnrnpuQ8VEK3 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC18.04■□□□□ 0.48
HnrnpuQ8VEK3 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HnrnpuQ8VEK3 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC18.04■□□□□ 0.48
HnrnpuQ8VEK3 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HnrnpuQ8VEK3 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HnrnpuQ8VEK3 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HnrnpuQ8VEK3 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
HnrnpuQ8VEK3 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HnrnpuQ8VEK3 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
HnrnpuQ8VEK3 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC18.04■□□□□ 0.48
HnrnpuQ8VEK3 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HnrnpuQ8VEK3 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HnrnpuQ8VEK3 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HnrnpuQ8VEK3 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HnrnpuQ8VEK3 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms