Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rpa1Q8VEE4 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Rpa1Q8VEE4 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rpa1Q8VEE4 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rpa1Q8VEE4 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rpa1Q8VEE4 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rpa1Q8VEE4 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rpa1Q8VEE4 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rpa1Q8VEE4 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.64□□□□□ -0.07
Rpa1Q8VEE4 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rpa1Q8VEE4 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rpa1Q8VEE4 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rpa1Q8VEE4 Gm8097-201ENSMUST00000117903 829 ntBASIC14.64□□□□□ -0.07
Rpa1Q8VEE4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rpa1Q8VEE4 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.64□□□□□ -0.07
Rpa1Q8VEE4 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rpa1Q8VEE4 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rpa1Q8VEE4 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rpa1Q8VEE4 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rpa1Q8VEE4 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rpa1Q8VEE4 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rpa1Q8VEE4 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rpa1Q8VEE4 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rpa1Q8VEE4 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rpa1Q8VEE4 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rpa1Q8VEE4 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rpa1Q8VEE4 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rpa1Q8VEE4 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.64□□□□□ -0.07
Rpa1Q8VEE4 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rpa1Q8VEE4 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Rpa1Q8VEE4 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Rpa1Q8VEE4 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Rpa1Q8VEE4 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Rpa1Q8VEE4 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Rpa1Q8VEE4 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms