Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
Q8VDP2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Q8VDP2 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.19□□□□□ -0.14
Q8VDP2 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q8VDP2 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Q8VDP2 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q8VDP2 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Q8VDP2 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q8VDP2 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Q8VDP2 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Q8VDP2 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q8VDP2 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q8VDP2 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q8VDP2 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q8VDP2 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.19□□□□□ -0.14
Q8VDP2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Q8VDP2 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q8VDP2 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q8VDP2 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q8VDP2 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q8VDP2 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Q8VDP2 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q8VDP2 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Q8VDP2 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Q8VDP2 Gm43868-201ENSMUST00000205187 2114 ntBASIC14.18□□□□□ -0.14
Q8VDP2 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q8VDP2 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q8VDP2 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q8VDP2 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q8VDP2 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Q8VDP2 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q8VDP2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q8VDP2 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Q8VDP2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Q8VDP2 Gm2274-201ENSMUST00000184539 609 ntBASIC14.18□□□□□ -0.14
Q8VDP2 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.18□□□□□ -0.14
Q8VDP2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q8VDP2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q8VDP2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q8VDP2 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q8VDP2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.18□□□□□ -0.14
Q8VDP2 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q8VDP2 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q8VDP2 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q8VDP2 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q8VDP2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q8VDP2 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q8VDP2 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q8VDP2 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Q8VDP2 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Q8VDP2 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Q8VDP2 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q8VDP2 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Q8VDP2 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q8VDP2 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.17□□□□□ -0.14
Q8VDP2 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Q8VDP2 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q8VDP2 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q8VDP2 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Q8VDP2 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q8VDP2 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Q8VDP2 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q8VDP2 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Q8VDP2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Q8VDP2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Q8VDP2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.17□□□□□ -0.14
Q8VDP2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Q8VDP2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q8VDP2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Q8VDP2 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q8VDP2 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q8VDP2 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q8VDP2 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q8VDP2 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q8VDP2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.17□□□□□ -0.14
Q8VDP2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q8VDP2 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Q8VDP2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Q8VDP2 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q8VDP2 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Q8VDP2 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Q8VDP2 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q8VDP2 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q8VDP2 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q8VDP2 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q8VDP2 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q8VDP2 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Q8VDP2 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q8VDP2 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Q8VDP2 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.16□□□□□ -0.14
Q8VDP2 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Q8VDP2 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q8VDP2 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Q8VDP2 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Q8VDP2 Gm25927-201ENSMUST00000175058 117 ntBASIC14.16□□□□□ -0.14
Q8VDP2 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.16□□□□□ -0.14
Q8VDP2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.16□□□□□ -0.14
Q8VDP2 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.16□□□□□ -0.14
Q8VDP2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.16□□□□□ -0.14
Q8VDP2 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms