Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm1Q8VC85 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm1Q8VC85 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm1Q8VC85 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
Lsm1Q8VC85 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm1Q8VC85 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm1Q8VC85 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.93□□□□□ -0.18
Lsm1Q8VC85 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.93□□□□□ -0.18
Lsm1Q8VC85 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Lsm1Q8VC85 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm1Q8VC85 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm1Q8VC85 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Lsm1Q8VC85 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm1Q8VC85 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm1Q8VC85 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm1Q8VC85 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm1Q8VC85 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm1Q8VC85 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Lsm1Q8VC85 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Lsm1Q8VC85 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lsm1Q8VC85 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm1Q8VC85 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm1Q8VC85 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm1Q8VC85 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm1Q8VC85 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm1Q8VC85 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm1Q8VC85 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm1Q8VC85 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm1Q8VC85 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm1Q8VC85 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm1Q8VC85 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC13.92□□□□□ -0.18
Lsm1Q8VC85 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.92□□□□□ -0.18
Lsm1Q8VC85 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm1Q8VC85 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm1Q8VC85 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.92□□□□□ -0.18
Lsm1Q8VC85 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.92□□□□□ -0.18
Lsm1Q8VC85 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.92□□□□□ -0.18
Lsm1Q8VC85 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm1Q8VC85 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm1Q8VC85 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm1Q8VC85 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm1Q8VC85 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm1Q8VC85 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Lsm1Q8VC85 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Lsm1Q8VC85 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm1Q8VC85 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm1Q8VC85 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm1Q8VC85 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm1Q8VC85 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm1Q8VC85 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm1Q8VC85 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Lsm1Q8VC85 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lsm1Q8VC85 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm1Q8VC85 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Lsm1Q8VC85 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.91□□□□□ -0.18
Lsm1Q8VC85 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.91□□□□□ -0.18
Lsm1Q8VC85 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm1Q8VC85 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.91□□□□□ -0.18
Lsm1Q8VC85 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm1Q8VC85 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm1Q8VC85 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm1Q8VC85 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm1Q8VC85 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.91□□□□□ -0.18
Lsm1Q8VC85 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC13.91□□□□□ -0.18
Lsm1Q8VC85 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.91□□□□□ -0.18
Lsm1Q8VC85 Gm2651-201ENSMUST00000203560 838 ntBASIC13.91□□□□□ -0.18
Lsm1Q8VC85 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm1Q8VC85 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Lsm1Q8VC85 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.91□□□□□ -0.18
Lsm1Q8VC85 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm1Q8VC85 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.91□□□□□ -0.18
Lsm1Q8VC85 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm1Q8VC85 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm1Q8VC85 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm1Q8VC85 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm1Q8VC85 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm1Q8VC85 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Lsm1Q8VC85 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Lsm1Q8VC85 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Lsm1Q8VC85 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm1Q8VC85 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm1Q8VC85 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Lsm1Q8VC85 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm1Q8VC85 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm1Q8VC85 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lsm1Q8VC85 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Lsm1Q8VC85 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm1Q8VC85 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm1Q8VC85 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Lsm1Q8VC85 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm1Q8VC85 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Lsm1Q8VC85 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm1Q8VC85 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm1Q8VC85 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.9□□□□□ -0.18
Lsm1Q8VC85 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm1Q8VC85 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm1Q8VC85 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm1Q8VC85 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Lsm1Q8VC85 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lsm1Q8VC85 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms