Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Nupl1-207ENSMUST00000225311 2475 ntBASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 AC166341.4-201ENSMUST00000220625 123 ntBASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 AC155252.2-201ENSMUST00000226946 680 ntBASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Top1mtQ8R4U6 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Top1mtQ8R4U6 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Top1mtQ8R4U6 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Top1mtQ8R4U6 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC17.36■□□□□ 0.37
Top1mtQ8R4U6 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC17.36■□□□□ 0.37
Top1mtQ8R4U6 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.36■□□□□ 0.37
Top1mtQ8R4U6 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.36■□□□□ 0.37
Top1mtQ8R4U6 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC17.36■□□□□ 0.37
Top1mtQ8R4U6 Gm18057-201ENSMUST00000208220 503 ntBASIC17.36■□□□□ 0.37
Top1mtQ8R4U6 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.36■□□□□ 0.37
Top1mtQ8R4U6 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC17.36■□□□□ 0.37
Top1mtQ8R4U6 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Top1mtQ8R4U6 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Top1mtQ8R4U6 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Top1mtQ8R4U6 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Top1mtQ8R4U6 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC17.36■□□□□ 0.37
Top1mtQ8R4U6 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Top1mtQ8R4U6 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Top1mtQ8R4U6 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Top1mtQ8R4U6 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Top1mtQ8R4U6 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Top1mtQ8R4U6 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Top1mtQ8R4U6 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.36■□□□□ 0.37
Top1mtQ8R4U6 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Top1mtQ8R4U6 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Top1mtQ8R4U6 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Top1mtQ8R4U6 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC17.35■□□□□ 0.37
Top1mtQ8R4U6 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Top1mtQ8R4U6 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Top1mtQ8R4U6 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Top1mtQ8R4U6 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Top1mtQ8R4U6 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC17.35■□□□□ 0.37
Top1mtQ8R4U6 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Top1mtQ8R4U6 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Top1mtQ8R4U6 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.35■□□□□ 0.37
Top1mtQ8R4U6 Gm11745-201ENSMUST00000121669 448 ntBASIC17.35■□□□□ 0.37
Top1mtQ8R4U6 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Top1mtQ8R4U6 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.35■□□□□ 0.37
Top1mtQ8R4U6 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.35■□□□□ 0.37
Top1mtQ8R4U6 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Top1mtQ8R4U6 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Top1mtQ8R4U6 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Top1mtQ8R4U6 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Top1mtQ8R4U6 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Top1mtQ8R4U6 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Top1mtQ8R4U6 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Top1mtQ8R4U6 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Top1mtQ8R4U6 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Top1mtQ8R4U6 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Top1mtQ8R4U6 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Top1mtQ8R4U6 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Top1mtQ8R4U6 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Top1mtQ8R4U6 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Top1mtQ8R4U6 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Top1mtQ8R4U6 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Top1mtQ8R4U6 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Top1mtQ8R4U6 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.34■□□□□ 0.37
Top1mtQ8R4U6 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Top1mtQ8R4U6 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Top1mtQ8R4U6 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Top1mtQ8R4U6 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Top1mtQ8R4U6 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Top1mtQ8R4U6 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Top1mtQ8R4U6 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms