Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Nudcd3Q8R1N4 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd3Q8R1N4 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nudcd3Q8R1N4 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nudcd3Q8R1N4 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nudcd3Q8R1N4 AC130669.1-201ENSMUST00000228537 1672 ntBASIC14.52□□□□□ -0.08
Nudcd3Q8R1N4 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nudcd3Q8R1N4 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nudcd3Q8R1N4 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nudcd3Q8R1N4 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Nudcd3Q8R1N4 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.52□□□□□ -0.08
Nudcd3Q8R1N4 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.52□□□□□ -0.08
Nudcd3Q8R1N4 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nudcd3Q8R1N4 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Nudcd3Q8R1N4 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nudcd3Q8R1N4 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nudcd3Q8R1N4 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Nudcd3Q8R1N4 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nudcd3Q8R1N4 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nudcd3Q8R1N4 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC14.52□□□□□ -0.09
Nudcd3Q8R1N4 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC14.52□□□□□ -0.09
Nudcd3Q8R1N4 Gm37153-201ENSMUST00000193637 231 ntBASIC14.52□□□□□ -0.09
Nudcd3Q8R1N4 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Nudcd3Q8R1N4 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.52□□□□□ -0.09
Nudcd3Q8R1N4 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nudcd3Q8R1N4 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nudcd3Q8R1N4 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nudcd3Q8R1N4 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nudcd3Q8R1N4 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nudcd3Q8R1N4 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nudcd3Q8R1N4 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.52□□□□□ -0.09
Nudcd3Q8R1N4 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nudcd3Q8R1N4 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Nudcd3Q8R1N4 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nudcd3Q8R1N4 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nudcd3Q8R1N4 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nudcd3Q8R1N4 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nudcd3Q8R1N4 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Nudcd3Q8R1N4 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nudcd3Q8R1N4 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nudcd3Q8R1N4 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nudcd3Q8R1N4 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Nudcd3Q8R1N4 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Nudcd3Q8R1N4 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.51□□□□□ -0.09
Nudcd3Q8R1N4 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.51□□□□□ -0.09
Nudcd3Q8R1N4 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.51□□□□□ -0.09
Nudcd3Q8R1N4 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nudcd3Q8R1N4 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nudcd3Q8R1N4 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nudcd3Q8R1N4 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Nudcd3Q8R1N4 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nudcd3Q8R1N4 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nudcd3Q8R1N4 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nudcd3Q8R1N4 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nudcd3Q8R1N4 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nudcd3Q8R1N4 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nudcd3Q8R1N4 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nudcd3Q8R1N4 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nudcd3Q8R1N4 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nudcd3Q8R1N4 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nudcd3Q8R1N4 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nudcd3Q8R1N4 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nudcd3Q8R1N4 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nudcd3Q8R1N4 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC14.5□□□□□ -0.09
Nudcd3Q8R1N4 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.5□□□□□ -0.09
Nudcd3Q8R1N4 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nudcd3Q8R1N4 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.5□□□□□ -0.09
Nudcd3Q8R1N4 Gm9726-201ENSMUST00000180321 678 ntBASIC14.5□□□□□ -0.09
Nudcd3Q8R1N4 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.5□□□□□ -0.09
Nudcd3Q8R1N4 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Nudcd3Q8R1N4 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Nudcd3Q8R1N4 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nudcd3Q8R1N4 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Nudcd3Q8R1N4 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.5□□□□□ -0.09
Nudcd3Q8R1N4 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nudcd3Q8R1N4 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nudcd3Q8R1N4 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nudcd3Q8R1N4 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nudcd3Q8R1N4 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Nudcd3Q8R1N4 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nudcd3Q8R1N4 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nudcd3Q8R1N4 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nudcd3Q8R1N4 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC14.49□□□□□ -0.09
Nudcd3Q8R1N4 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Nudcd3Q8R1N4 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Nudcd3Q8R1N4 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Nudcd3Q8R1N4 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.49□□□□□ -0.09
Nudcd3Q8R1N4 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nudcd3Q8R1N4 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nudcd3Q8R1N4 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Nudcd3Q8R1N4 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Nudcd3Q8R1N4 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.49□□□□□ -0.09
Nudcd3Q8R1N4 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC14.49□□□□□ -0.09
Nudcd3Q8R1N4 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nudcd3Q8R1N4 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nudcd3Q8R1N4 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nudcd3Q8R1N4 Gm33142-201ENSMUST00000193913 867 ntBASIC14.49□□□□□ -0.09
Nudcd3Q8R1N4 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nudcd3Q8R1N4 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nudcd3Q8R1N4 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms