Protein–RNA interactions for Protein: Q8K5B8

Hoxc12, Homeobox protein Hox-C12, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc12Q8K5B8 Gm16011-201ENSMUST00000121567 2662 ntBASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Gm14057-201ENSMUST00000120631 482 ntBASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Gm22175-201ENSMUST00000175007 78 ntBASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Gm25948-201ENSMUST00000175334 112 ntBASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Gm27920-201ENSMUST00000183953 96 ntBASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Gm18049-201ENSMUST00000208909 581 ntBASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Hoxc12Q8K5B8 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 AA543401-201ENSMUST00000164248 1269 ntBASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Mir7023-201ENSMUST00000185093 64 ntBASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Hoxc12Q8K5B8 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Hoxc12Q8K5B8 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc12Q8K5B8 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc12Q8K5B8 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc12Q8K5B8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Hoxc12Q8K5B8 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc12Q8K5B8 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Hoxc12Q8K5B8 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc12Q8K5B8 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc12Q8K5B8 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Hoxc12Q8K5B8 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Hoxc12Q8K5B8 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.17□□□□□ -0.46
Hoxc12Q8K5B8 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC12.17□□□□□ -0.46
Hoxc12Q8K5B8 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Hoxc12Q8K5B8 Gm25144-201ENSMUST00000179561 110 ntBASIC12.17□□□□□ -0.46
Hoxc12Q8K5B8 Gm25352-201ENSMUST00000179815 110 ntBASIC12.17□□□□□ -0.46
Hoxc12Q8K5B8 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.17□□□□□ -0.46
Hoxc12Q8K5B8 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms