Protein–RNA interactions for Protein: Q8CGP4

Hist1h2aa, Histone H2A, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h2aaQ8CGP4 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.68□□□□□ -0.22
Hist1h2aaQ8CGP4 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hist1h2aaQ8CGP4 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hist1h2aaQ8CGP4 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hist1h2aaQ8CGP4 Gm8749-201ENSMUST00000117737 331 ntBASIC13.68□□□□□ -0.22
Hist1h2aaQ8CGP4 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hist1h2aaQ8CGP4 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.68□□□□□ -0.22
Hist1h2aaQ8CGP4 Gm27525-201ENSMUST00000184465 107 ntBASIC13.68□□□□□ -0.22
Hist1h2aaQ8CGP4 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.68□□□□□ -0.22
Hist1h2aaQ8CGP4 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.68□□□□□ -0.22
Hist1h2aaQ8CGP4 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hist1h2aaQ8CGP4 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hist1h2aaQ8CGP4 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hist1h2aaQ8CGP4 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hist1h2aaQ8CGP4 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Hist1h2aaQ8CGP4 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Hist1h2aaQ8CGP4 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hist1h2aaQ8CGP4 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hist1h2aaQ8CGP4 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hist1h2aaQ8CGP4 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hist1h2aaQ8CGP4 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hist1h2aaQ8CGP4 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hist1h2aaQ8CGP4 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hist1h2aaQ8CGP4 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
Hist1h2aaQ8CGP4 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Hist1h2aaQ8CGP4 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Hist1h2aaQ8CGP4 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hist1h2aaQ8CGP4 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hist1h2aaQ8CGP4 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hist1h2aaQ8CGP4 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hist1h2aaQ8CGP4 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Hist1h2aaQ8CGP4 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Gm15427-201ENSMUST00000117288 531 ntBASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Hist1h2aaQ8CGP4 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.66□□□□□ -0.22
Hist1h2aaQ8CGP4 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist1h2aaQ8CGP4 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hist1h2aaQ8CGP4 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Hist1h2aaQ8CGP4 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Hist1h2aaQ8CGP4 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Hist1h2aaQ8CGP4 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist1h2aaQ8CGP4 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist1h2aaQ8CGP4 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Hist1h2aaQ8CGP4 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist1h2aaQ8CGP4 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hist1h2aaQ8CGP4 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.66□□□□□ -0.22
Hist1h2aaQ8CGP4 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.66□□□□□ -0.22
Hist1h2aaQ8CGP4 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist1h2aaQ8CGP4 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.66□□□□□ -0.22
Hist1h2aaQ8CGP4 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist1h2aaQ8CGP4 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist1h2aaQ8CGP4 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Hist1h2aaQ8CGP4 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist1h2aaQ8CGP4 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Hist1h2aaQ8CGP4 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC13.66□□□□□ -0.22
Hist1h2aaQ8CGP4 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Hist1h2aaQ8CGP4 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist1h2aaQ8CGP4 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Hist1h2aaQ8CGP4 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hist1h2aaQ8CGP4 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Hist1h2aaQ8CGP4 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist1h2aaQ8CGP4 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Hist1h2aaQ8CGP4 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms