Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ShfQ8CG80 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ShfQ8CG80 Gm11452-201ENSMUST00000122376 690 ntBASIC12.95□□□□□ -0.34
ShfQ8CG80 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.95□□□□□ -0.34
ShfQ8CG80 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
ShfQ8CG80 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ShfQ8CG80 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.95□□□□□ -0.34
ShfQ8CG80 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.95□□□□□ -0.34
ShfQ8CG80 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.95□□□□□ -0.34
ShfQ8CG80 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ShfQ8CG80 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ShfQ8CG80 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ShfQ8CG80 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
ShfQ8CG80 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.95□□□□□ -0.34
ShfQ8CG80 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ShfQ8CG80 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.95□□□□□ -0.34
ShfQ8CG80 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.95□□□□□ -0.34
ShfQ8CG80 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
ShfQ8CG80 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ShfQ8CG80 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ShfQ8CG80 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ShfQ8CG80 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
ShfQ8CG80 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
ShfQ8CG80 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ShfQ8CG80 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ShfQ8CG80 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
ShfQ8CG80 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
ShfQ8CG80 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ShfQ8CG80 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ShfQ8CG80 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.94□□□□□ -0.34
ShfQ8CG80 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ShfQ8CG80 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
ShfQ8CG80 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.94□□□□□ -0.34
ShfQ8CG80 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.94□□□□□ -0.34
ShfQ8CG80 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
ShfQ8CG80 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
ShfQ8CG80 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ShfQ8CG80 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ShfQ8CG80 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
ShfQ8CG80 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ShfQ8CG80 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ShfQ8CG80 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
ShfQ8CG80 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ShfQ8CG80 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.94□□□□□ -0.34
ShfQ8CG80 Gm16198-201ENSMUST00000118766 670 ntBASIC12.94□□□□□ -0.34
ShfQ8CG80 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ShfQ8CG80 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ShfQ8CG80 Mir5126-201ENSMUST00000175513 77 ntBASIC12.94□□□□□ -0.34
ShfQ8CG80 Gm27628-201ENSMUST00000184911 107 ntBASIC12.94□□□□□ -0.34
ShfQ8CG80 Gm17971-201ENSMUST00000190239 806 ntBASIC12.94□□□□□ -0.34
ShfQ8CG80 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ShfQ8CG80 Gm37230-201ENSMUST00000194491 818 ntBASIC12.94□□□□□ -0.34
ShfQ8CG80 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.94□□□□□ -0.34
ShfQ8CG80 Gm45747-201ENSMUST00000212203 999 ntBASIC12.94□□□□□ -0.34
ShfQ8CG80 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.94□□□□□ -0.34
ShfQ8CG80 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ShfQ8CG80 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ShfQ8CG80 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
ShfQ8CG80 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ShfQ8CG80 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ShfQ8CG80 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
ShfQ8CG80 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ShfQ8CG80 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ShfQ8CG80 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
ShfQ8CG80 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ShfQ8CG80 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
ShfQ8CG80 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.94□□□□□ -0.34
ShfQ8CG80 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
ShfQ8CG80 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
ShfQ8CG80 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
ShfQ8CG80 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
ShfQ8CG80 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ShfQ8CG80 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ShfQ8CG80 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ShfQ8CG80 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
ShfQ8CG80 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ShfQ8CG80 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ShfQ8CG80 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ShfQ8CG80 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
ShfQ8CG80 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ShfQ8CG80 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ShfQ8CG80 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ShfQ8CG80 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ShfQ8CG80 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ShfQ8CG80 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ShfQ8CG80 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ShfQ8CG80 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.93□□□□□ -0.34
ShfQ8CG80 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ShfQ8CG80 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
ShfQ8CG80 Gm45098-201ENSMUST00000207179 657 ntBASIC12.93□□□□□ -0.34
ShfQ8CG80 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.93□□□□□ -0.34
ShfQ8CG80 Gm15590-201ENSMUST00000078419 552 ntBASIC12.93□□□□□ -0.34
ShfQ8CG80 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.93□□□□□ -0.34
ShfQ8CG80 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ShfQ8CG80 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
ShfQ8CG80 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ShfQ8CG80 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ShfQ8CG80 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
ShfQ8CG80 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
ShfQ8CG80 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms