Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.36□□□□□ -0.11
Ccdc28bQ8CEG5 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc28bQ8CEG5 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc28bQ8CEG5 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc28bQ8CEG5 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.35□□□□□ -0.11
Ccdc28bQ8CEG5 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ccdc28bQ8CEG5 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc28bQ8CEG5 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc28bQ8CEG5 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc28bQ8CEG5 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc28bQ8CEG5 Gm37644-201ENSMUST00000192190 2270 ntBASIC14.35□□□□□ -0.11
Ccdc28bQ8CEG5 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc28bQ8CEG5 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc28bQ8CEG5 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc28bQ8CEG5 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.35□□□□□ -0.11
Ccdc28bQ8CEG5 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc28bQ8CEG5 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.35□□□□□ -0.11
Ccdc28bQ8CEG5 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.35□□□□□ -0.11
Ccdc28bQ8CEG5 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.35□□□□□ -0.11
Ccdc28bQ8CEG5 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc28bQ8CEG5 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC14.35□□□□□ -0.11
Ccdc28bQ8CEG5 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ccdc28bQ8CEG5 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc28bQ8CEG5 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc28bQ8CEG5 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc28bQ8CEG5 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.35□□□□□ -0.11
Ccdc28bQ8CEG5 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc28bQ8CEG5 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc28bQ8CEG5 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc28bQ8CEG5 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc28bQ8CEG5 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc28bQ8CEG5 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc28bQ8CEG5 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc28bQ8CEG5 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ccdc28bQ8CEG5 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc28bQ8CEG5 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.34□□□□□ -0.11
Ccdc28bQ8CEG5 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc28bQ8CEG5 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc28bQ8CEG5 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc28bQ8CEG5 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc28bQ8CEG5 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc28bQ8CEG5 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc28bQ8CEG5 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc28bQ8CEG5 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc28bQ8CEG5 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccdc28bQ8CEG5 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc28bQ8CEG5 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc28bQ8CEG5 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.34□□□□□ -0.11
Ccdc28bQ8CEG5 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.34□□□□□ -0.11
Ccdc28bQ8CEG5 Rbfox2-207ENSMUST00000227533 1041 ntBASIC14.34□□□□□ -0.11
Ccdc28bQ8CEG5 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc28bQ8CEG5 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ccdc28bQ8CEG5 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc28bQ8CEG5 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc28bQ8CEG5 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc28bQ8CEG5 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc28bQ8CEG5 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Ccdc28bQ8CEG5 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc28bQ8CEG5 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.34□□□□□ -0.11
Ccdc28bQ8CEG5 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc28bQ8CEG5 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc28bQ8CEG5 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc28bQ8CEG5 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc28bQ8CEG5 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc28bQ8CEG5 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ccdc28bQ8CEG5 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Ccdc28bQ8CEG5 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Ccdc28bQ8CEG5 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc28bQ8CEG5 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc28bQ8CEG5 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.11
Ccdc28bQ8CEG5 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc28bQ8CEG5 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ccdc28bQ8CEG5 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc28bQ8CEG5 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc28bQ8CEG5 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc28bQ8CEG5 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Ccdc28bQ8CEG5 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc28bQ8CEG5 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc28bQ8CEG5 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.33□□□□□ -0.12
Ccdc28bQ8CEG5 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc28bQ8CEG5 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.33□□□□□ -0.12
Ccdc28bQ8CEG5 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.33□□□□□ -0.12
Ccdc28bQ8CEG5 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ccdc28bQ8CEG5 Gm27704-201ENSMUST00000185094 107 ntBASIC14.33□□□□□ -0.12
Ccdc28bQ8CEG5 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms