Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Gm18246-201ENSMUST00000221023 728 ntBASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Lysmd4Q8CC84 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd4Q8CC84 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lysmd4Q8CC84 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd4Q8CC84 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd4Q8CC84 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd4Q8CC84 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd4Q8CC84 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd4Q8CC84 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13□□□□□ -0.33
Lysmd4Q8CC84 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd4Q8CC84 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd4Q8CC84 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lysmd4Q8CC84 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd4Q8CC84 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd4Q8CC84 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd4Q8CC84 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC13□□□□□ -0.33
Lysmd4Q8CC84 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13□□□□□ -0.33
Lysmd4Q8CC84 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd4Q8CC84 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Lysmd4Q8CC84 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13□□□□□ -0.33
Lysmd4Q8CC84 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd4Q8CC84 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lysmd4Q8CC84 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13□□□□□ -0.33
Lysmd4Q8CC84 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lysmd4Q8CC84 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd4Q8CC84 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13□□□□□ -0.33
Lysmd4Q8CC84 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13□□□□□ -0.33
Lysmd4Q8CC84 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC13□□□□□ -0.33
Lysmd4Q8CC84 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd4Q8CC84 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lysmd4Q8CC84 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd4Q8CC84 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd4Q8CC84 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd4Q8CC84 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd4Q8CC84 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd4Q8CC84 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Lysmd4Q8CC84 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd4Q8CC84 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
Lysmd4Q8CC84 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd4Q8CC84 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Lysmd4Q8CC84 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Lysmd4Q8CC84 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13□□□□□ -0.33
Lysmd4Q8CC84 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd4Q8CC84 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd4Q8CC84 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd4Q8CC84 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd4Q8CC84 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd4Q8CC84 Ksr1-207ENSMUST00000226282 5260 ntBASIC12.99□□□□□ -0.33
Lysmd4Q8CC84 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Lysmd4Q8CC84 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.99□□□□□ -0.33
Lysmd4Q8CC84 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd4Q8CC84 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd4Q8CC84 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd4Q8CC84 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
Lysmd4Q8CC84 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Lysmd4Q8CC84 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Lysmd4Q8CC84 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Lysmd4Q8CC84 Gm7977-201ENSMUST00000193787 748 ntBASIC12.99□□□□□ -0.33
Lysmd4Q8CC84 Gm44357-201ENSMUST00000195897 142 ntBASIC12.99□□□□□ -0.33
Lysmd4Q8CC84 Gm19658-201ENSMUST00000196231 138 ntBASIC12.99□□□□□ -0.33
Lysmd4Q8CC84 Gm44367-201ENSMUST00000196836 138 ntBASIC12.99□□□□□ -0.33
Lysmd4Q8CC84 Gm44350-201ENSMUST00000197197 138 ntBASIC12.99□□□□□ -0.33
Lysmd4Q8CC84 Gm44390-201ENSMUST00000197533 144 ntBASIC12.99□□□□□ -0.33
Lysmd4Q8CC84 Gm44313-201ENSMUST00000198018 138 ntBASIC12.99□□□□□ -0.33
Lysmd4Q8CC84 Gm44486-201ENSMUST00000198508 138 ntBASIC12.99□□□□□ -0.33
Lysmd4Q8CC84 Gm44314-201ENSMUST00000199263 138 ntBASIC12.99□□□□□ -0.33
Lysmd4Q8CC84 Gm44394-201ENSMUST00000199558 138 ntBASIC12.99□□□□□ -0.33
Lysmd4Q8CC84 Gm44484-201ENSMUST00000199873 138 ntBASIC12.99□□□□□ -0.33
Lysmd4Q8CC84 Gm44466-201ENSMUST00000200264 138 ntBASIC12.99□□□□□ -0.33
Lysmd4Q8CC84 Gm44359-201ENSMUST00000200671 138 ntBASIC12.99□□□□□ -0.33
Lysmd4Q8CC84 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms