Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sh3rf2Q8BZT2 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 Gm7488-201ENSMUST00000117148 684 ntBASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 Gm4875-201ENSMUST00000118257 786 ntBASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sh3rf2Q8BZT2 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 Gm3436-201ENSMUST00000179930 840 ntBASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sh3rf2Q8BZT2 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf2Q8BZT2 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Sh3rf2Q8BZT2 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
Sh3rf2Q8BZT2 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.67□□□□□ -0.06
Sh3rf2Q8BZT2 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf2Q8BZT2 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf2Q8BZT2 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf2Q8BZT2 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf2Q8BZT2 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sh3rf2Q8BZT2 Gm15321-201ENSMUST00000121290 288 ntBASIC14.67□□□□□ -0.06
Sh3rf2Q8BZT2 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Sh3rf2Q8BZT2 Gm24694-201ENSMUST00000180054 110 ntBASIC14.67□□□□□ -0.06
Sh3rf2Q8BZT2 Gm27663-201ENSMUST00000184839 110 ntBASIC14.67□□□□□ -0.06
Sh3rf2Q8BZT2 Gm29667-201ENSMUST00000190817 490 ntBASIC14.67□□□□□ -0.06
Sh3rf2Q8BZT2 AA619741-201ENSMUST00000195095 646 ntBASIC14.67□□□□□ -0.06
Sh3rf2Q8BZT2 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.67□□□□□ -0.06
Sh3rf2Q8BZT2 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.67□□□□□ -0.06
Sh3rf2Q8BZT2 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms