Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip4Q8BQP8 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip4Q8BQP8 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip4Q8BQP8 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC16.1■□□□□ 0.17
Rab11fip4Q8BQP8 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip4Q8BQP8 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.1■□□□□ 0.17
Rab11fip4Q8BQP8 AA543401-201ENSMUST00000164248 1269 ntBASIC16.1■□□□□ 0.17
Rab11fip4Q8BQP8 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.1■□□□□ 0.17
Rab11fip4Q8BQP8 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip4Q8BQP8 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip4Q8BQP8 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip4Q8BQP8 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Rab11fip4Q8BQP8 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rab11fip4Q8BQP8 Fgf17-202ENSMUST00000227123 1336 ntBASIC16.1■□□□□ 0.17
Rab11fip4Q8BQP8 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip4Q8BQP8 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip4Q8BQP8 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip4Q8BQP8 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip4Q8BQP8 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip4Q8BQP8 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
Rab11fip4Q8BQP8 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rab11fip4Q8BQP8 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Rab11fip4Q8BQP8 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.1■□□□□ 0.17
Rab11fip4Q8BQP8 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 Gm18057-201ENSMUST00000208220 503 ntBASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 CT025555.1-201ENSMUST00000225901 1217 ntBASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rab11fip4Q8BQP8 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Rab11fip4Q8BQP8 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rab11fip4Q8BQP8 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rab11fip4Q8BQP8 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rab11fip4Q8BQP8 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.17
Rab11fip4Q8BQP8 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Rab11fip4Q8BQP8 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rab11fip4Q8BQP8 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Rab11fip4Q8BQP8 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Rab11fip4Q8BQP8 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Rab11fip4Q8BQP8 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.08■□□□□ 0.16
Rab11fip4Q8BQP8 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rab11fip4Q8BQP8 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.08■□□□□ 0.16
Rab11fip4Q8BQP8 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rab11fip4Q8BQP8 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.08■□□□□ 0.16
Rab11fip4Q8BQP8 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rab11fip4Q8BQP8 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rab11fip4Q8BQP8 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.08■□□□□ 0.16
Rab11fip4Q8BQP8 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.08■□□□□ 0.16
Rab11fip4Q8BQP8 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.08■□□□□ 0.16
Rab11fip4Q8BQP8 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rab11fip4Q8BQP8 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rab11fip4Q8BQP8 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rab11fip4Q8BQP8 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rab11fip4Q8BQP8 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Rab11fip4Q8BQP8 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Rab11fip4Q8BQP8 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 Gm11960-202ENSMUST00000181063 2858 ntBASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 Gm25948-201ENSMUST00000175334 112 ntBASIC16.07■□□□□ 0.16
Rab11fip4Q8BQP8 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms