Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sfr1Q8BP27 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sfr1Q8BP27 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sfr1Q8BP27 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Sfr1Q8BP27 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sfr1Q8BP27 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sfr1Q8BP27 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sfr1Q8BP27 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sfr1Q8BP27 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Sfr1Q8BP27 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sfr1Q8BP27 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Sfr1Q8BP27 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Sfr1Q8BP27 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sfr1Q8BP27 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sfr1Q8BP27 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sfr1Q8BP27 Gm27920-201ENSMUST00000183953 96 ntBASIC14.79□□□□□ -0.04
Sfr1Q8BP27 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Sfr1Q8BP27 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.79□□□□□ -0.04
Sfr1Q8BP27 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.79□□□□□ -0.04
Sfr1Q8BP27 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sfr1Q8BP27 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sfr1Q8BP27 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.79□□□□□ -0.04
Sfr1Q8BP27 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sfr1Q8BP27 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.79□□□□□ -0.04
Sfr1Q8BP27 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Sfr1Q8BP27 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sfr1Q8BP27 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Sfr1Q8BP27 Efs-202ENSMUST00000227037 2540 ntBASIC14.79□□□□□ -0.04
Sfr1Q8BP27 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Gm9726-201ENSMUST00000180321 678 ntBASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Mir6990-201ENSMUST00000183724 91 ntBASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sfr1Q8BP27 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.77□□□□□ -0.04
Sfr1Q8BP27 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Sfr1Q8BP27 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sfr1Q8BP27 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sfr1Q8BP27 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sfr1Q8BP27 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sfr1Q8BP27 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sfr1Q8BP27 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sfr1Q8BP27 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sfr1Q8BP27 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Sfr1Q8BP27 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC14.77□□□□□ -0.05
Sfr1Q8BP27 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Sfr1Q8BP27 Gm2810-201ENSMUST00000118681 990 ntBASIC14.77□□□□□ -0.05
Sfr1Q8BP27 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.77□□□□□ -0.05
Sfr1Q8BP27 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Sfr1Q8BP27 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.77□□□□□ -0.05
Sfr1Q8BP27 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.77□□□□□ -0.05
Sfr1Q8BP27 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms