Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf38Q8BI21 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf38Q8BI21 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf38Q8BI21 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf38Q8BI21 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf38Q8BI21 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rnf38Q8BI21 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf38Q8BI21 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf38Q8BI21 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rnf38Q8BI21 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.03□□□□□ -0.16
Rnf38Q8BI21 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf38Q8BI21 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.03□□□□□ -0.16
Rnf38Q8BI21 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.03□□□□□ -0.16
Rnf38Q8BI21 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rnf38Q8BI21 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf38Q8BI21 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf38Q8BI21 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rnf38Q8BI21 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rnf38Q8BI21 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf38Q8BI21 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf38Q8BI21 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf38Q8BI21 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf38Q8BI21 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf38Q8BI21 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Rnf38Q8BI21 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf38Q8BI21 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Rnf38Q8BI21 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.02□□□□□ -0.16
Rnf38Q8BI21 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf38Q8BI21 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf38Q8BI21 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.02□□□□□ -0.16
Rnf38Q8BI21 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Rnf38Q8BI21 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf38Q8BI21 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf38Q8BI21 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rnf38Q8BI21 Gm13464-201ENSMUST00000119418 935 ntBASIC14.02□□□□□ -0.17
Rnf38Q8BI21 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf38Q8BI21 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.02□□□□□ -0.17
Rnf38Q8BI21 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.02□□□□□ -0.17
Rnf38Q8BI21 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Rnf38Q8BI21 Gm27300-201ENSMUST00000184085 97 ntBASIC14.02□□□□□ -0.17
Rnf38Q8BI21 Gm27335-201ENSMUST00000184758 97 ntBASIC14.02□□□□□ -0.17
Rnf38Q8BI21 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC14.02□□□□□ -0.17
Rnf38Q8BI21 Gm2651-201ENSMUST00000203560 838 ntBASIC14.02□□□□□ -0.17
Rnf38Q8BI21 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf38Q8BI21 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf38Q8BI21 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf38Q8BI21 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf38Q8BI21 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf38Q8BI21 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf38Q8BI21 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf38Q8BI21 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf38Q8BI21 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.02□□□□□ -0.17
Rnf38Q8BI21 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf38Q8BI21 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf38Q8BI21 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Rnf38Q8BI21 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Rnf38Q8BI21 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf38Q8BI21 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Rnf38Q8BI21 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Rnf38Q8BI21 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf38Q8BI21 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf38Q8BI21 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf38Q8BI21 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf38Q8BI21 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf38Q8BI21 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf38Q8BI21 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf38Q8BI21 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf38Q8BI21 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf38Q8BI21 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf38Q8BI21 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf38Q8BI21 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf38Q8BI21 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf38Q8BI21 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.01□□□□□ -0.17
Rnf38Q8BI21 Gm13597-201ENSMUST00000121239 375 ntBASIC14.01□□□□□ -0.17
Rnf38Q8BI21 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.01□□□□□ -0.17
Rnf38Q8BI21 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rnf38Q8BI21 Gm18733-201ENSMUST00000173950 856 ntBASIC14.01□□□□□ -0.17
Rnf38Q8BI21 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf38Q8BI21 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.01□□□□□ -0.17
Rnf38Q8BI21 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf38Q8BI21 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rnf38Q8BI21 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf38Q8BI21 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.01□□□□□ -0.17
Rnf38Q8BI21 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.01□□□□□ -0.17
Rnf38Q8BI21 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf38Q8BI21 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.01□□□□□ -0.17
Rnf38Q8BI21 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Rnf38Q8BI21 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Rnf38Q8BI21 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.01□□□□□ -0.17
Rnf38Q8BI21 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Rnf38Q8BI21 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Rnf38Q8BI21 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf38Q8BI21 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf38Q8BI21 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf38Q8BI21 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf38Q8BI21 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf38Q8BI21 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14□□□□□ -0.17
Rnf38Q8BI21 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf38Q8BI21 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Rnf38Q8BI21 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms