Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC12.72□□□□□ -0.37
Slc5a7Q8BGY9 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc5a7Q8BGY9 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc5a7Q8BGY9 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Slc5a7Q8BGY9 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc5a7Q8BGY9 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Slc5a7Q8BGY9 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc5a7Q8BGY9 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc5a7Q8BGY9 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Slc5a7Q8BGY9 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Slc5a7Q8BGY9 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc5a7Q8BGY9 Gm37411-201ENSMUST00000194180 2282 ntBASIC12.71□□□□□ -0.37
Slc5a7Q8BGY9 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc5a7Q8BGY9 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc5a7Q8BGY9 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc5a7Q8BGY9 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc5a7Q8BGY9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Slc5a7Q8BGY9 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.71□□□□□ -0.37
Slc5a7Q8BGY9 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC12.71□□□□□ -0.37
Slc5a7Q8BGY9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC12.71□□□□□ -0.37
Slc5a7Q8BGY9 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc5a7Q8BGY9 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Slc5a7Q8BGY9 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Slc5a7Q8BGY9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc5a7Q8BGY9 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Slc5a7Q8BGY9 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Slc5a7Q8BGY9 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Slc5a7Q8BGY9 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Slc5a7Q8BGY9 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Slc5a7Q8BGY9 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Slc5a7Q8BGY9 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Slc5a7Q8BGY9 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Slc5a7Q8BGY9 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Slc5a7Q8BGY9 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Slc5a7Q8BGY9 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.71□□□□□ -0.38
Slc5a7Q8BGY9 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Slc5a7Q8BGY9 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Gm17808-201ENSMUST00000200859 894 ntBASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Grk6-205ENSMUST00000224653 2976 ntBASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Slc5a7Q8BGY9 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Slc5a7Q8BGY9 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slc5a7Q8BGY9 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slc5a7Q8BGY9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slc5a7Q8BGY9 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc5a7Q8BGY9 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc5a7Q8BGY9 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc5a7Q8BGY9 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc5a7Q8BGY9 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc5a7Q8BGY9 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc5a7Q8BGY9 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc5a7Q8BGY9 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC12.69□□□□□ -0.38
Slc5a7Q8BGY9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Slc5a7Q8BGY9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Slc5a7Q8BGY9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Slc5a7Q8BGY9 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc5a7Q8BGY9 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC12.69□□□□□ -0.38
Slc5a7Q8BGY9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slc5a7Q8BGY9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc5a7Q8BGY9 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slc5a7Q8BGY9 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc5a7Q8BGY9 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc5a7Q8BGY9 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc5a7Q8BGY9 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc5a7Q8BGY9 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slc5a7Q8BGY9 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc5a7Q8BGY9 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Slc5a7Q8BGY9 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Slc5a7Q8BGY9 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms