Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Gm2756-201ENSMUST00000195851 400 ntBASIC17.04■□□□□ 0.32
Samm50Q8BGH2 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17.04■□□□□ 0.32
Samm50Q8BGH2 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Samm50Q8BGH2 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Samm50Q8BGH2 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Samm50Q8BGH2 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Samm50Q8BGH2 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Samm50Q8BGH2 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.04■□□□□ 0.32
Samm50Q8BGH2 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Samm50Q8BGH2 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Samm50Q8BGH2 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Samm50Q8BGH2 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Samm50Q8BGH2 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Samm50Q8BGH2 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Samm50Q8BGH2 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Samm50Q8BGH2 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Samm50Q8BGH2 Gm43767-201ENSMUST00000198933 381 ntBASIC17.03■□□□□ 0.32
Samm50Q8BGH2 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Samm50Q8BGH2 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Samm50Q8BGH2 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Samm50Q8BGH2 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Samm50Q8BGH2 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Samm50Q8BGH2 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Samm50Q8BGH2 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Samm50Q8BGH2 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Samm50Q8BGH2 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Samm50Q8BGH2 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Samm50Q8BGH2 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Samm50Q8BGH2 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC17.03■□□□□ 0.32
Samm50Q8BGH2 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.03■□□□□ 0.32
Samm50Q8BGH2 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Samm50Q8BGH2 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Samm50Q8BGH2 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
Samm50Q8BGH2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Samm50Q8BGH2 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Samm50Q8BGH2 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Samm50Q8BGH2 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Samm50Q8BGH2 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Samm50Q8BGH2 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Samm50Q8BGH2 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Samm50Q8BGH2 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Samm50Q8BGH2 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Samm50Q8BGH2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Samm50Q8BGH2 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.02■□□□□ 0.32
Samm50Q8BGH2 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Samm50Q8BGH2 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Samm50Q8BGH2 Gm5177-201ENSMUST00000183092 997 ntBASIC17.02■□□□□ 0.32
Samm50Q8BGH2 Gm17968-201ENSMUST00000194902 784 ntBASIC17.02■□□□□ 0.32
Samm50Q8BGH2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Samm50Q8BGH2 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Samm50Q8BGH2 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Samm50Q8BGH2 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Samm50Q8BGH2 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Samm50Q8BGH2 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Samm50Q8BGH2 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Samm50Q8BGH2 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Samm50Q8BGH2 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Samm50Q8BGH2 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Samm50Q8BGH2 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
Samm50Q8BGH2 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Samm50Q8BGH2 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Samm50Q8BGH2 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Samm50Q8BGH2 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Samm50Q8BGH2 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Samm50Q8BGH2 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Samm50Q8BGH2 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Samm50Q8BGH2 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Samm50Q8BGH2 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.01■□□□□ 0.31
Samm50Q8BGH2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Samm50Q8BGH2 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Samm50Q8BGH2 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Samm50Q8BGH2 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.01■□□□□ 0.31
Samm50Q8BGH2 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Samm50Q8BGH2 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.01■□□□□ 0.31
Samm50Q8BGH2 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.01■□□□□ 0.31
Samm50Q8BGH2 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Samm50Q8BGH2 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Samm50Q8BGH2 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC17.01■□□□□ 0.31
Samm50Q8BGH2 Gm25911-201ENSMUST00000157621 56 ntBASIC17.01■□□□□ 0.31
Samm50Q8BGH2 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Samm50Q8BGH2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Samm50Q8BGH2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Samm50Q8BGH2 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC17.01■□□□□ 0.31
Samm50Q8BGH2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Samm50Q8BGH2 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Samm50Q8BGH2 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Samm50Q8BGH2 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Samm50Q8BGH2 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Samm50Q8BGH2 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Samm50Q8BGH2 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Samm50Q8BGH2 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Samm50Q8BGH2 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Samm50Q8BGH2 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Samm50Q8BGH2 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Samm50Q8BGH2 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Samm50Q8BGH2 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.01■□□□□ 0.31
Samm50Q8BGH2 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Samm50Q8BGH2 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Samm50Q8BGH2 Gm28182-201ENSMUST00000188354 2477 ntBASIC17.01■□□□□ 0.31
Samm50Q8BGH2 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms