Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Gm25990-201ENSMUST00000102440 86 ntBASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Gm13464-201ENSMUST00000119418 935 ntBASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Gm11764-201ENSMUST00000120221 623 ntBASIC12.28□□□□□ -0.44
Upk3bQ80YF6 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Gm18669-201ENSMUST00000216049 778 ntBASIC12.28□□□□□ -0.44
Upk3bQ80YF6 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3bQ80YF6 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Upk3bQ80YF6 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Upk3bQ80YF6 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Upk3bQ80YF6 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.44
Upk3bQ80YF6 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Upk3bQ80YF6 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Upk3bQ80YF6 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.27□□□□□ -0.44
Upk3bQ80YF6 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Upk3bQ80YF6 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3bQ80YF6 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Upk3bQ80YF6 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3bQ80YF6 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
Upk3bQ80YF6 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3bQ80YF6 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Upk3bQ80YF6 Gm14042-201ENSMUST00000120139 833 ntBASIC12.27□□□□□ -0.45
Upk3bQ80YF6 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3bQ80YF6 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3bQ80YF6 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Upk3bQ80YF6 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.27□□□□□ -0.45
Upk3bQ80YF6 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3bQ80YF6 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3bQ80YF6 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3bQ80YF6 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3bQ80YF6 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3bQ80YF6 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3bQ80YF6 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3bQ80YF6 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3bQ80YF6 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Upk3bQ80YF6 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3bQ80YF6 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Upk3bQ80YF6 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Upk3bQ80YF6 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3bQ80YF6 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3bQ80YF6 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Upk3bQ80YF6 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3bQ80YF6 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3bQ80YF6 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Upk3bQ80YF6 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Gm44357-201ENSMUST00000195897 142 ntBASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Gm19658-201ENSMUST00000196231 138 ntBASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Gm44367-201ENSMUST00000196836 138 ntBASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Gm44350-201ENSMUST00000197197 138 ntBASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Gm44390-201ENSMUST00000197533 144 ntBASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Gm44313-201ENSMUST00000198018 138 ntBASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Gm44486-201ENSMUST00000198508 138 ntBASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Gm44314-201ENSMUST00000199263 138 ntBASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Gm44394-201ENSMUST00000199558 138 ntBASIC12.26□□□□□ -0.45
Upk3bQ80YF6 Gm44484-201ENSMUST00000199873 138 ntBASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 12.2 ms