Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Gm17795-201ENSMUST00000214505 757 ntBASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 AC166574.6-201ENSMUST00000227889 1806 ntBASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Gm11524-201ENSMUST00000119349 807 ntBASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Gm7287-201ENSMUST00000205267 602 ntBASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Gm7561-201ENSMUST00000211203 886 ntBASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ttc28Q80XJ3 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Gm9726-201ENSMUST00000180321 678 ntBASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Gm18054-201ENSMUST00000207539 555 ntBASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ttc28Q80XJ3 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ttc28Q80XJ3 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ttc28Q80XJ3 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ttc28Q80XJ3 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ttc28Q80XJ3 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ttc28Q80XJ3 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ttc28Q80XJ3 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ttc28Q80XJ3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ttc28Q80XJ3 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ttc28Q80XJ3 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ttc28Q80XJ3 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms