Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.21■□□□□ 0.03
Prpf38bQ80SY5 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Prpf38bQ80SY5 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC15.21■□□□□ 0.03
Prpf38bQ80SY5 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf38bQ80SY5 Gm7286-201ENSMUST00000182691 1007 ntBASIC15.21■□□□□ 0.03
Prpf38bQ80SY5 Gm27680-201ENSMUST00000184192 160 ntBASIC15.21■□□□□ 0.03
Prpf38bQ80SY5 Gm38294-201ENSMUST00000192831 381 ntBASIC15.21■□□□□ 0.03
Prpf38bQ80SY5 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.21■□□□□ 0.03
Prpf38bQ80SY5 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC15.21■□□□□ 0.03
Prpf38bQ80SY5 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf38bQ80SY5 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf38bQ80SY5 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf38bQ80SY5 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Prpf38bQ80SY5 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf38bQ80SY5 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf38bQ80SY5 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf38bQ80SY5 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Prpf38bQ80SY5 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Prpf38bQ80SY5 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Prpf38bQ80SY5 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Prpf38bQ80SY5 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Prpf38bQ80SY5 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Prpf38bQ80SY5 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Gm24694-201ENSMUST00000180054 110 ntBASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Gm27663-201ENSMUST00000184839 110 ntBASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Prpf38bQ80SY5 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf38bQ80SY5 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.19■□□□□ 0.02
Prpf38bQ80SY5 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.19■□□□□ 0.02
Prpf38bQ80SY5 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf38bQ80SY5 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC15.19■□□□□ 0.02
Prpf38bQ80SY5 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Prpf38bQ80SY5 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf38bQ80SY5 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf38bQ80SY5 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf38bQ80SY5 Gm6973-201ENSMUST00000117080 721 ntBASIC15.19■□□□□ 0.02
Prpf38bQ80SY5 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf38bQ80SY5 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf38bQ80SY5 Gm8602-201ENSMUST00000184045 607 ntBASIC15.19■□□□□ 0.02
Prpf38bQ80SY5 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC15.19■□□□□ 0.02
Prpf38bQ80SY5 AY702102-202ENSMUST00000194651 1173 ntBASIC15.19■□□□□ 0.02
Prpf38bQ80SY5 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf38bQ80SY5 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.19■□□□□ 0.02
Prpf38bQ80SY5 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Prpf38bQ80SY5 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf38bQ80SY5 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf38bQ80SY5 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf38bQ80SY5 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf38bQ80SY5 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf38bQ80SY5 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf38bQ80SY5 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
Prpf38bQ80SY5 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf38bQ80SY5 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Prpf38bQ80SY5 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Prpf38bQ80SY5 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Prpf38bQ80SY5 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms