Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.07■□□□□ 0
Cspg5Q71M36 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Cspg5Q71M36 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cspg5Q71M36 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cspg5Q71M36 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cspg5Q71M36 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cspg5Q71M36 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.07■□□□□ 0
Cspg5Q71M36 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Cspg5Q71M36 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Cspg5Q71M36 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Cspg5Q71M36 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.07■□□□□ 0
Cspg5Q71M36 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Cspg5Q71M36 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.07■□□□□ 0
Cspg5Q71M36 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cspg5Q71M36 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Cspg5Q71M36 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Cspg5Q71M36 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cspg5Q71M36 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cspg5Q71M36 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.06■□□□□ 0
Cspg5Q71M36 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cspg5Q71M36 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Cspg5Q71M36 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cspg5Q71M36 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cspg5Q71M36 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Cspg5Q71M36 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.06■□□□□ 0
Cspg5Q71M36 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cspg5Q71M36 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.06■□□□□ 0
Cspg5Q71M36 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cspg5Q71M36 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.06■□□□□ 0
Cspg5Q71M36 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.06■□□□□ 0
Cspg5Q71M36 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.06■□□□□ 0
Cspg5Q71M36 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cspg5Q71M36 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.06■□□□□ 0
Cspg5Q71M36 Gm7730-201ENSMUST00000212486 454 ntBASIC15.06■□□□□ 0
Cspg5Q71M36 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.06■□□□□ 0
Cspg5Q71M36 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cspg5Q71M36 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cspg5Q71M36 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.06■□□□□ 0
Cspg5Q71M36 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cspg5Q71M36 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cspg5Q71M36 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.06■□□□□ 0
Cspg5Q71M36 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cspg5Q71M36 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Cspg5Q71M36 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.06■□□□□ 0
Cspg5Q71M36 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cspg5Q71M36 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.06■□□□□ 0
Cspg5Q71M36 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cspg5Q71M36 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Cspg5Q71M36 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Cspg5Q71M36 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cspg5Q71M36 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Cspg5Q71M36 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.05■□□□□ 0
Cspg5Q71M36 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.05■□□□□ 0
Cspg5Q71M36 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Cspg5Q71M36 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.05■□□□□ 0
Cspg5Q71M36 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cspg5Q71M36 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Cspg5Q71M36 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cspg5Q71M36 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Cspg5Q71M36 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cspg5Q71M36 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cspg5Q71M36 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cspg5Q71M36 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC15.05■□□□□ -0
Cspg5Q71M36 Mir7684-201ENSMUST00000183858 60 ntBASIC15.05■□□□□ -0
Cspg5Q71M36 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cspg5Q71M36 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC15.05■□□□□ -0
Cspg5Q71M36 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cspg5Q71M36 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.05■□□□□ -0
Cspg5Q71M36 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cspg5Q71M36 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.05■□□□□ -0
Cspg5Q71M36 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cspg5Q71M36 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cspg5Q71M36 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Cspg5Q71M36 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cspg5Q71M36 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Cspg5Q71M36 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cspg5Q71M36 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Cspg5Q71M36 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cspg5Q71M36 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.05■□□□□ -0
Cspg5Q71M36 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cspg5Q71M36 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Cspg5Q71M36 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
Cspg5Q71M36 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cspg5Q71M36 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.04■□□□□ -0
Cspg5Q71M36 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cspg5Q71M36 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cspg5Q71M36 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cspg5Q71M36 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cspg5Q71M36 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cspg5Q71M36 Gm8096-201ENSMUST00000209921 1591 ntBASIC15.04■□□□□ -0
Cspg5Q71M36 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cspg5Q71M36 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cspg5Q71M36 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.04■□□□□ -0
Cspg5Q71M36 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cspg5Q71M36 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
Cspg5Q71M36 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cspg5Q71M36 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.04■□□□□ -0
Cspg5Q71M36 Gm15487-201ENSMUST00000122373 465 ntBASIC15.04■□□□□ -0
Cspg5Q71M36 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.04■□□□□ -0
Cspg5Q71M36 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms