Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 Gm13226-201ENSMUST00000117838 404 ntBASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 Gm8463-201ENSMUST00000208573 613 ntBASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 Gm45331-201ENSMUST00000209868 554 ntBASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ddx55Q6ZPL9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Ddx55Q6ZPL9 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Ddx55Q6ZPL9 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Ddx55Q6ZPL9 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Ddx55Q6ZPL9 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ddx55Q6ZPL9 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC16.39■□□□□ 0.21
Ddx55Q6ZPL9 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx55Q6ZPL9 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx55Q6ZPL9 Gm9816-201ENSMUST00000122292 1414 ntBASIC16.39■□□□□ 0.21
Ddx55Q6ZPL9 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx55Q6ZPL9 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.39■□□□□ 0.21
Ddx55Q6ZPL9 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx55Q6ZPL9 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC16.39■□□□□ 0.21
Ddx55Q6ZPL9 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx55Q6ZPL9 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.39■□□□□ 0.21
Ddx55Q6ZPL9 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx55Q6ZPL9 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx55Q6ZPL9 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx55Q6ZPL9 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC16.39■□□□□ 0.21
Ddx55Q6ZPL9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx55Q6ZPL9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx55Q6ZPL9 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx55Q6ZPL9 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx55Q6ZPL9 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx55Q6ZPL9 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx55Q6ZPL9 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.39■□□□□ 0.21
Ddx55Q6ZPL9 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ddx55Q6ZPL9 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Ddx55Q6ZPL9 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.39■□□□□ 0.21
Ddx55Q6ZPL9 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Ddx55Q6ZPL9 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx55Q6ZPL9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx55Q6ZPL9 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Ddx55Q6ZPL9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx55Q6ZPL9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx55Q6ZPL9 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
Ddx55Q6ZPL9 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx55Q6ZPL9 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx55Q6ZPL9 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx55Q6ZPL9 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx55Q6ZPL9 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ddx55Q6ZPL9 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx55Q6ZPL9 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.38■□□□□ 0.21
Ddx55Q6ZPL9 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.38■□□□□ 0.21
Ddx55Q6ZPL9 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx55Q6ZPL9 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.38■□□□□ 0.21
Ddx55Q6ZPL9 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Ddx55Q6ZPL9 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx55Q6ZPL9 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx55Q6ZPL9 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx55Q6ZPL9 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC16.38■□□□□ 0.21
Ddx55Q6ZPL9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx55Q6ZPL9 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx55Q6ZPL9 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx55Q6ZPL9 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC16.38■□□□□ 0.21
Ddx55Q6ZPL9 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx55Q6ZPL9 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ddx55Q6ZPL9 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ddx55Q6ZPL9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ddx55Q6ZPL9 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ddx55Q6ZPL9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ddx55Q6ZPL9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ddx55Q6ZPL9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ddx55Q6ZPL9 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ddx55Q6ZPL9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ddx55Q6ZPL9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Ddx55Q6ZPL9 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ddx55Q6ZPL9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ddx55Q6ZPL9 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms