Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scaf4Q6PFF0 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.33□□□□□ -0.12
Scaf4Q6PFF0 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scaf4Q6PFF0 Gm14042-201ENSMUST00000120139 833 ntBASIC14.33□□□□□ -0.12
Scaf4Q6PFF0 Gm13836-201ENSMUST00000121159 501 ntBASIC14.33□□□□□ -0.12
Scaf4Q6PFF0 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC14.33□□□□□ -0.12
Scaf4Q6PFF0 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scaf4Q6PFF0 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Scaf4Q6PFF0 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scaf4Q6PFF0 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scaf4Q6PFF0 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Scaf4Q6PFF0 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Scaf4Q6PFF0 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scaf4Q6PFF0 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scaf4Q6PFF0 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scaf4Q6PFF0 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scaf4Q6PFF0 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scaf4Q6PFF0 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Scaf4Q6PFF0 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scaf4Q6PFF0 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scaf4Q6PFF0 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scaf4Q6PFF0 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scaf4Q6PFF0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Scaf4Q6PFF0 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scaf4Q6PFF0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scaf4Q6PFF0 Gm7222-201ENSMUST00000117512 906 ntBASIC14.32□□□□□ -0.12
Scaf4Q6PFF0 Gm11764-201ENSMUST00000120221 623 ntBASIC14.32□□□□□ -0.12
Scaf4Q6PFF0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scaf4Q6PFF0 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scaf4Q6PFF0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scaf4Q6PFF0 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.32□□□□□ -0.12
Scaf4Q6PFF0 Gm2451-201ENSMUST00000199447 999 ntBASIC14.32□□□□□ -0.12
Scaf4Q6PFF0 Gm10290-201ENSMUST00000200451 999 ntBASIC14.32□□□□□ -0.12
Scaf4Q6PFF0 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.32□□□□□ -0.12
Scaf4Q6PFF0 Olfr286-202ENSMUST00000205305 969 ntBASIC14.32□□□□□ -0.12
Scaf4Q6PFF0 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scaf4Q6PFF0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scaf4Q6PFF0 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scaf4Q6PFF0 AC131743.5-201ENSMUST00000220775 1618 ntBASIC14.32□□□□□ -0.12
Scaf4Q6PFF0 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scaf4Q6PFF0 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.32□□□□□ -0.12
Scaf4Q6PFF0 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Scaf4Q6PFF0 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scaf4Q6PFF0 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.32□□□□□ -0.12
Scaf4Q6PFF0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Scaf4Q6PFF0 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scaf4Q6PFF0 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scaf4Q6PFF0 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Scaf4Q6PFF0 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Gm14859-201ENSMUST00000117752 357 ntBASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Gm45167-201ENSMUST00000208007 322 ntBASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.31□□□□□ -0.12
Scaf4Q6PFF0 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.3□□□□□ -0.12
Scaf4Q6PFF0 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms