Protein–RNA interactions for Protein: Q62209

Sycp1, Synaptonemal complex protein 1, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sycp1Q62209 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sycp1Q62209 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sycp1Q62209 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Sycp1Q62209 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sycp1Q62209 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sycp1Q62209 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Sycp1Q62209 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sycp1Q62209 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC16.3■□□□□ 0.2
Sycp1Q62209 AC131743.5-201ENSMUST00000220775 1618 ntBASIC16.3■□□□□ 0.2
Sycp1Q62209 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sycp1Q62209 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sycp1Q62209 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.3■□□□□ 0.2
Sycp1Q62209 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Sycp1Q62209 Gm45779-201ENSMUST00000212189 4064 ntBASIC16.3■□□□□ 0.2
Sycp1Q62209 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sycp1Q62209 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sycp1Q62209 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sycp1Q62209 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Sycp1Q62209 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sycp1Q62209 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.29■□□□□ 0.2
Sycp1Q62209 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sycp1Q62209 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sycp1Q62209 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sycp1Q62209 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sycp1Q62209 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sycp1Q62209 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sycp1Q62209 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sycp1Q62209 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Sycp1Q62209 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sycp1Q62209 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sycp1Q62209 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.29■□□□□ 0.2
Sycp1Q62209 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Sycp1Q62209 Gm15427-201ENSMUST00000117288 531 ntBASIC16.29■□□□□ 0.2
Sycp1Q62209 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.29■□□□□ 0.2
Sycp1Q62209 Gm8597-201ENSMUST00000191525 1109 ntBASIC16.29■□□□□ 0.2
Sycp1Q62209 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC16.29■□□□□ 0.2
Sycp1Q62209 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Sycp1Q62209 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.29■□□□□ 0.2
Sycp1Q62209 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Sycp1Q62209 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC16.29■□□□□ 0.2
Sycp1Q62209 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sycp1Q62209 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Sycp1Q62209 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.29■□□□□ 0.2
Sycp1Q62209 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sycp1Q62209 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sycp1Q62209 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sycp1Q62209 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Sycp1Q62209 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sycp1Q62209 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Sycp1Q62209 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sycp1Q62209 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sycp1Q62209 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sycp1Q62209 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sycp1Q62209 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sycp1Q62209 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Sycp1Q62209 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sycp1Q62209 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sycp1Q62209 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sycp1Q62209 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sycp1Q62209 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Sycp1Q62209 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sycp1Q62209 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sycp1Q62209 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sycp1Q62209 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sycp1Q62209 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sycp1Q62209 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sycp1Q62209 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sycp1Q62209 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sycp1Q62209 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sycp1Q62209 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC16.28■□□□□ 0.2
Sycp1Q62209 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.28■□□□□ 0.2
Sycp1Q62209 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
Sycp1Q62209 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Sycp1Q62209 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sycp1Q62209 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.28■□□□□ 0.2
Sycp1Q62209 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sycp1Q62209 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.28■□□□□ 0.2
Sycp1Q62209 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sycp1Q62209 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sycp1Q62209 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sycp1Q62209 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.28■□□□□ 0.2
Sycp1Q62209 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sycp1Q62209 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sycp1Q62209 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Sycp1Q62209 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Sycp1Q62209 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sycp1Q62209 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sycp1Q62209 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sycp1Q62209 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sycp1Q62209 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sycp1Q62209 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sycp1Q62209 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sycp1Q62209 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sycp1Q62209 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sycp1Q62209 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sycp1Q62209 Gm14822-201ENSMUST00000122247 291 ntBASIC16.27■□□□□ 0.2
Sycp1Q62209 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.27■□□□□ 0.2
Sycp1Q62209 Gm16026-204ENSMUST00000162652 683 ntBASIC16.27■□□□□ 0.2
Sycp1Q62209 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.27■□□□□ 0.2
Sycp1Q62209 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms