Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim27Q62158 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim27Q62158 Gm13015-201ENSMUST00000118674 204 ntBASIC17.82■□□□□ 0.44
Trim27Q62158 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.82■□□□□ 0.44
Trim27Q62158 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC17.82■□□□□ 0.44
Trim27Q62158 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.82■□□□□ 0.44
Trim27Q62158 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.82■□□□□ 0.44
Trim27Q62158 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim27Q62158 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim27Q62158 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim27Q62158 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim27Q62158 Ssr1-204ENSMUST00000225319 1610 ntBASIC17.82■□□□□ 0.44
Trim27Q62158 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.82■□□□□ 0.44
Trim27Q62158 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trim27Q62158 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim27Q62158 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim27Q62158 Gm37411-201ENSMUST00000194180 2282 ntBASIC17.82■□□□□ 0.44
Trim27Q62158 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim27Q62158 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim27Q62158 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Trim27Q62158 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim27Q62158 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Trim27Q62158 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim27Q62158 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC17.81■□□□□ 0.44
Trim27Q62158 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim27Q62158 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim27Q62158 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Trim27Q62158 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim27Q62158 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.81■□□□□ 0.44
Trim27Q62158 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim27Q62158 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.81■□□□□ 0.44
Trim27Q62158 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.81■□□□□ 0.44
Trim27Q62158 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim27Q62158 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim27Q62158 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Trim27Q62158 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim27Q62158 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trim27Q62158 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim27Q62158 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim27Q62158 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim27Q62158 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trim27Q62158 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Trim27Q62158 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim27Q62158 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trim27Q62158 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC17.8■□□□□ 0.44
Trim27Q62158 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim27Q62158 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim27Q62158 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC17.8■□□□□ 0.44
Trim27Q62158 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim27Q62158 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.8■□□□□ 0.44
Trim27Q62158 Mir6990-201ENSMUST00000183724 91 ntBASIC17.8■□□□□ 0.44
Trim27Q62158 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.8■□□□□ 0.44
Trim27Q62158 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim27Q62158 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim27Q62158 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Trim27Q62158 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim27Q62158 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim27Q62158 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim27Q62158 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Trim27Q62158 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim27Q62158 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim27Q62158 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim27Q62158 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trim27Q62158 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Trim27Q62158 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim27Q62158 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim27Q62158 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim27Q62158 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim27Q62158 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim27Q62158 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim27Q62158 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC17.79■□□□□ 0.44
Trim27Q62158 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim27Q62158 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.79■□□□□ 0.44
Trim27Q62158 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim27Q62158 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim27Q62158 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Trim27Q62158 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim27Q62158 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.79■□□□□ 0.44
Trim27Q62158 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.79■□□□□ 0.44
Trim27Q62158 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.79■□□□□ 0.44
Trim27Q62158 Gm24513-201ENSMUST00000174964 138 ntBASIC17.79■□□□□ 0.44
Trim27Q62158 Gm38225-201ENSMUST00000194001 393 ntBASIC17.79■□□□□ 0.44
Trim27Q62158 Gm44335-201ENSMUST00000196879 141 ntBASIC17.79■□□□□ 0.44
Trim27Q62158 Gm44297-201ENSMUST00000198304 141 ntBASIC17.79■□□□□ 0.44
Trim27Q62158 Gm44346-201ENSMUST00000198851 141 ntBASIC17.79■□□□□ 0.44
Trim27Q62158 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Trim27Q62158 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim27Q62158 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim27Q62158 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim27Q62158 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim27Q62158 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim27Q62158 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim27Q62158 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim27Q62158 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trim27Q62158 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim27Q62158 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trim27Q62158 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trim27Q62158 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trim27Q62158 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
Trim27Q62158 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms