Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctr9Q62018 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctr9Q62018 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctr9Q62018 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctr9Q62018 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctr9Q62018 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
Ctr9Q62018 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC17.11■□□□□ 0.33
Ctr9Q62018 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC17.11■□□□□ 0.33
Ctr9Q62018 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctr9Q62018 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ctr9Q62018 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ctr9Q62018 Gm17837-201ENSMUST00000186435 985 ntBASIC17.11■□□□□ 0.33
Ctr9Q62018 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ctr9Q62018 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ctr9Q62018 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC17.11■□□□□ 0.33
Ctr9Q62018 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.11■□□□□ 0.33
Ctr9Q62018 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctr9Q62018 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctr9Q62018 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ctr9Q62018 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC17.11■□□□□ 0.33
Ctr9Q62018 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctr9Q62018 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctr9Q62018 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctr9Q62018 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctr9Q62018 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctr9Q62018 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctr9Q62018 CT025610.1-201ENSMUST00000224552 1786 ntBASIC17.1■□□□□ 0.33
Ctr9Q62018 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctr9Q62018 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ctr9Q62018 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctr9Q62018 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctr9Q62018 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctr9Q62018 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC17.1■□□□□ 0.33
Ctr9Q62018 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctr9Q62018 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Ctr9Q62018 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ctr9Q62018 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Ctr9Q62018 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ctr9Q62018 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctr9Q62018 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ctr9Q62018 Gm9719-201ENSMUST00000162765 543 ntBASIC17.1■□□□□ 0.33
Ctr9Q62018 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ctr9Q62018 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ctr9Q62018 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC17.1■□□□□ 0.33
Ctr9Q62018 Gm6888-201ENSMUST00000221983 706 ntBASIC17.1■□□□□ 0.33
Ctr9Q62018 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctr9Q62018 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctr9Q62018 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctr9Q62018 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC17.1■□□□□ 0.33
Ctr9Q62018 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctr9Q62018 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ctr9Q62018 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ctr9Q62018 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctr9Q62018 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctr9Q62018 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ctr9Q62018 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctr9Q62018 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ctr9Q62018 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ctr9Q62018 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ctr9Q62018 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Ctr9Q62018 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctr9Q62018 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctr9Q62018 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctr9Q62018 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctr9Q62018 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC17.09■□□□□ 0.33
Ctr9Q62018 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctr9Q62018 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ctr9Q62018 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ctr9Q62018 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.09■□□□□ 0.33
Ctr9Q62018 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctr9Q62018 Gm25144-201ENSMUST00000179561 110 ntBASIC17.09■□□□□ 0.33
Ctr9Q62018 Gm25352-201ENSMUST00000179815 110 ntBASIC17.09■□□□□ 0.33
Ctr9Q62018 Gm27533-201ENSMUST00000183800 152 ntBASIC17.09■□□□□ 0.33
Ctr9Q62018 Gm27306-201ENSMUST00000183970 107 ntBASIC17.09■□□□□ 0.33
Ctr9Q62018 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctr9Q62018 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctr9Q62018 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctr9Q62018 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ctr9Q62018 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Ctr9Q62018 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.09■□□□□ 0.33
Ctr9Q62018 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctr9Q62018 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.09■□□□□ 0.33
Ctr9Q62018 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ctr9Q62018 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC17.09■□□□□ 0.33
Ctr9Q62018 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Ctr9Q62018 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctr9Q62018 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ctr9Q62018 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Ctr9Q62018 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Ctr9Q62018 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ctr9Q62018 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
Ctr9Q62018 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Ctr9Q62018 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ctr9Q62018 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ctr9Q62018 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ctr9Q62018 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ctr9Q62018 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Ctr9Q62018 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC17.08■□□□□ 0.32
Ctr9Q62018 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC17.08■□□□□ 0.32
Ctr9Q62018 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms