Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Gli3Q61602 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gli3Q61602 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gli3Q61602 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gli3Q61602 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gli3Q61602 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Gli3Q61602 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gli3Q61602 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Gli3Q61602 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC19.17■□□□□ 0.66
Gli3Q61602 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC19.17■□□□□ 0.66
Gli3Q61602 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gli3Q61602 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC19.17■□□□□ 0.66
Gli3Q61602 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC19.17■□□□□ 0.66
Gli3Q61602 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gli3Q61602 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Gli3Q61602 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gli3Q61602 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gli3Q61602 Mir497b-201ENSMUST00000093601 125 ntBASIC19.17■□□□□ 0.66
Gli3Q61602 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
Gli3Q61602 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gli3Q61602 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC19.16■□□□□ 0.66
Gli3Q61602 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gli3Q61602 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gli3Q61602 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Gli3Q61602 Ighv1-51-201ENSMUST00000192903 354 ntBASIC19.16■□□□□ 0.66
Gli3Q61602 Gm2824-203ENSMUST00000226189 1228 ntBASIC19.16■□□□□ 0.66
Gli3Q61602 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gli3Q61602 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gli3Q61602 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gli3Q61602 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gli3Q61602 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gli3Q61602 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC19.16■□□□□ 0.66
Gli3Q61602 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gli3Q61602 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gli3Q61602 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
Gli3Q61602 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gli3Q61602 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gli3Q61602 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gli3Q61602 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Gli3Q61602 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Gli3Q61602 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Gli3Q61602 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gli3Q61602 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Gli3Q61602 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Gli3Q61602 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gli3Q61602 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC19.15■□□□□ 0.66
Gli3Q61602 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gli3Q61602 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gli3Q61602 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC19.15■□□□□ 0.66
Gli3Q61602 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gli3Q61602 Gm29608-201ENSMUST00000190444 463 ntBASIC19.15■□□□□ 0.66
Gli3Q61602 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC19.15■□□□□ 0.66
Gli3Q61602 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Gli3Q61602 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gli3Q61602 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gli3Q61602 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Gli3Q61602 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gli3Q61602 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gli3Q61602 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gli3Q61602 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Gli3Q61602 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gli3Q61602 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gli3Q61602 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gli3Q61602 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gli3Q61602 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.15■□□□□ 0.66
Gli3Q61602 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.15■□□□□ 0.66
Gli3Q61602 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gli3Q61602 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gli3Q61602 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gli3Q61602 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gli3Q61602 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gli3Q61602 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC19.15■□□□□ 0.66
Gli3Q61602 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC19.15■□□□□ 0.66
Gli3Q61602 Mir1943-201ENSMUST00000158276 73 ntBASIC19.15■□□□□ 0.66
Gli3Q61602 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Gli3Q61602 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC19.15■□□□□ 0.66
Gli3Q61602 Gm10109-202ENSMUST00000206890 1211 ntBASIC19.15■□□□□ 0.66
Gli3Q61602 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Gli3Q61602 Gm10109-201ENSMUST00000072123 1078 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Gli3Q61602 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Gli3Q61602 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Gli3Q61602 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Gli3Q61602 Ccdc166-201ENSMUST00000182172 2584 ntBASIC19.14■□□□□ 0.66
Gli3Q61602 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Gli3Q61602 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC19.14■□□□□ 0.65
Gli3Q61602 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Gli3Q61602 Snord83b-201ENSMUST00000104546 94 ntBASIC19.14■□□□□ 0.65
Gli3Q61602 Gm8546-201ENSMUST00000178288 1264 ntBASIC19.14■□□□□ 0.65
Gli3Q61602 Gm7467-201ENSMUST00000185173 652 ntBASIC19.14■□□□□ 0.65
Gli3Q61602 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC19.14■□□□□ 0.65
Gli3Q61602 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gli3Q61602 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gli3Q61602 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Gli3Q61602 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gli3Q61602 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Gli3Q61602 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gli3Q61602 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gli3Q61602 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gli3Q61602 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Gli3Q61602 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms