Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm14701-201ENSMUST00000117156 348 ntBASIC10.76□□□□□ -0.69
Foxc1Q61572 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
Foxc1Q61572 Gm11025-201ENSMUST00000140773 466 ntBASIC10.76□□□□□ -0.69
Foxc1Q61572 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Foxc1Q61572 Gm25911-201ENSMUST00000157621 56 ntBASIC10.76□□□□□ -0.69
Foxc1Q61572 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Foxc1Q61572 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Foxc1Q61572 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC10.76□□□□□ -0.69
Foxc1Q61572 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC10.76□□□□□ -0.69
Foxc1Q61572 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Foxc1Q61572 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Foxc1Q61572 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Foxc1Q61572 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC10.76□□□□□ -0.69
Foxc1Q61572 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Foxc1Q61572 Gm43697-201ENSMUST00000199637 2581 ntBASIC10.76□□□□□ -0.69
Foxc1Q61572 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Foxc1Q61572 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Foxc1Q61572 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Foxc1Q61572 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Foxc1Q61572 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Foxc1Q61572 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC10.76□□□□□ -0.69
Foxc1Q61572 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Foxc1Q61572 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Foxc1Q61572 Gm38577-201ENSMUST00000221531 4545 ntBASIC10.76□□□□□ -0.69
Foxc1Q61572 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Foxc1Q61572 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
Foxc1Q61572 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Foxc1Q61572 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Foxc1Q61572 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC10.76□□□□□ -0.69
Foxc1Q61572 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC10.76□□□□□ -0.69
Foxc1Q61572 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Foxc1Q61572 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC10.76□□□□□ -0.69
Foxc1Q61572 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Foxc1Q61572 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Foxc1Q61572 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC10.75□□□□□ -0.69
Foxc1Q61572 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Foxc1Q61572 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Foxc1Q61572 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC10.75□□□□□ -0.69
Foxc1Q61572 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC10.75□□□□□ -0.69
Foxc1Q61572 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Foxc1Q61572 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Foxc1Q61572 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Foxc1Q61572 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Foxc1Q61572 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Foxc1Q61572 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Foxc1Q61572 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC10.75□□□□□ -0.69
Foxc1Q61572 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Foxc1Q61572 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Foxc1Q61572 Gm45072-201ENSMUST00000208673 929 ntBASIC10.75□□□□□ -0.69
Foxc1Q61572 Gm45166-201ENSMUST00000209073 683 ntBASIC10.75□□□□□ -0.69
Foxc1Q61572 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC10.75□□□□□ -0.69
Foxc1Q61572 AC154572.2-201ENSMUST00000225105 997 ntBASIC10.75□□□□□ -0.69
Foxc1Q61572 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Foxc1Q61572 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Foxc1Q61572 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Foxc1Q61572 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC10.75□□□□□ -0.69
Foxc1Q61572 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Foxc1Q61572 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Foxc1Q61572 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC10.75□□□□□ -0.69
Foxc1Q61572 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Foxc1Q61572 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Foxc1Q61572 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Foxc1Q61572 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Foxc1Q61572 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Foxc1Q61572 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Foxc1Q61572 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Foxc1Q61572 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Foxc1Q61572 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC10.74□□□□□ -0.69
Foxc1Q61572 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Foxc1Q61572 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Foxc1Q61572 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Foxc1Q61572 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Foxc1Q61572 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Foxc1Q61572 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Foxc1Q61572 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Foxc1Q61572 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Foxc1Q61572 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC10.74□□□□□ -0.69
Foxc1Q61572 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Foxc1Q61572 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Foxc1Q61572 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Foxc1Q61572 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Foxc1Q61572 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC10.74□□□□□ -0.69
Foxc1Q61572 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Foxc1Q61572 H2af-ps-201ENSMUST00000119066 295 ntBASIC10.74□□□□□ -0.69
Foxc1Q61572 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Foxc1Q61572 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC10.74□□□□□ -0.69
Foxc1Q61572 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Foxc1Q61572 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Foxc1Q61572 Gm29107-201ENSMUST00000190910 347 ntBASIC10.74□□□□□ -0.69
Foxc1Q61572 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
Foxc1Q61572 AC159295.1-201ENSMUST00000225326 940 ntBASIC10.74□□□□□ -0.69
Foxc1Q61572 CT010506.4-201ENSMUST00000225457 351 ntBASIC10.74□□□□□ -0.69
Foxc1Q61572 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Foxc1Q61572 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Foxc1Q61572 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Foxc1Q61572 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Foxc1Q61572 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Foxc1Q61572 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Foxc1Q61572 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Foxc1Q61572 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms