Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.63□□□□□ -0.23
Sox17Q61473 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox17Q61473 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.63□□□□□ -0.23
Sox17Q61473 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox17Q61473 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox17Q61473 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Sox17Q61473 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox17Q61473 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.63□□□□□ -0.23
Sox17Q61473 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox17Q61473 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox17Q61473 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Sox17Q61473 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox17Q61473 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox17Q61473 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox17Q61473 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox17Q61473 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox17Q61473 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox17Q61473 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Sox17Q61473 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox17Q61473 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox17Q61473 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox17Q61473 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Sox17Q61473 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox17Q61473 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sox17Q61473 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Sox17Q61473 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox17Q61473 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Sox17Q61473 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox17Q61473 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Sox17Q61473 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox17Q61473 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Sox17Q61473 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox17Q61473 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.62□□□□□ -0.23
Sox17Q61473 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.62□□□□□ -0.23
Sox17Q61473 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox17Q61473 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC13.62□□□□□ -0.23
Sox17Q61473 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox17Q61473 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox17Q61473 Gm11780-201ENSMUST00000136880 516 ntBASIC13.62□□□□□ -0.23
Sox17Q61473 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox17Q61473 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.62□□□□□ -0.23
Sox17Q61473 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.62□□□□□ -0.23
Sox17Q61473 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox17Q61473 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.62□□□□□ -0.23
Sox17Q61473 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Sox17Q61473 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox17Q61473 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox17Q61473 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox17Q61473 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox17Q61473 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox17Q61473 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox17Q61473 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox17Q61473 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox17Q61473 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Sox17Q61473 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox17Q61473 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox17Q61473 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox17Q61473 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox17Q61473 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox17Q61473 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sox17Q61473 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sox17Q61473 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC13.62□□□□□ -0.23
Sox17Q61473 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox17Q61473 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox17Q61473 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox17Q61473 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.61□□□□□ -0.23
Sox17Q61473 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox17Q61473 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox17Q61473 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Sox17Q61473 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox17Q61473 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Sox17Q61473 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox17Q61473 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox17Q61473 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox17Q61473 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Sox17Q61473 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Sox17Q61473 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sox17Q61473 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.61□□□□□ -0.23
Sox17Q61473 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Sox17Q61473 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.61□□□□□ -0.23
Sox17Q61473 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox17Q61473 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox17Q61473 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.61□□□□□ -0.23
Sox17Q61473 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox17Q61473 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.61□□□□□ -0.23
Sox17Q61473 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox17Q61473 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Sox17Q61473 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox17Q61473 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox17Q61473 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sox17Q61473 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Sox17Q61473 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.6□□□□□ -0.23
Sox17Q61473 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox17Q61473 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox17Q61473 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox17Q61473 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox17Q61473 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.6□□□□□ -0.23
Sox17Q61473 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Sox17Q61473 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Sox17Q61473 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms