Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx2Q61412 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Vsx2Q61412 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx2Q61412 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Vsx2Q61412 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx2Q61412 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.18□□□□□ -0.14
Vsx2Q61412 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx2Q61412 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx2Q61412 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Vsx2Q61412 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx2Q61412 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx2Q61412 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx2Q61412 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Vsx2Q61412 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx2Q61412 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.18□□□□□ -0.14
Vsx2Q61412 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.18□□□□□ -0.14
Vsx2Q61412 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.18□□□□□ -0.14
Vsx2Q61412 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx2Q61412 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx2Q61412 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx2Q61412 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx2Q61412 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx2Q61412 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.17□□□□□ -0.14
Vsx2Q61412 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx2Q61412 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx2Q61412 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx2Q61412 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Vsx2Q61412 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Vsx2Q61412 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.17□□□□□ -0.14
Vsx2Q61412 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx2Q61412 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx2Q61412 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx2Q61412 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Vsx2Q61412 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.17□□□□□ -0.14
Vsx2Q61412 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.17□□□□□ -0.14
Vsx2Q61412 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.17□□□□□ -0.14
Vsx2Q61412 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Vsx2Q61412 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.17□□□□□ -0.14
Vsx2Q61412 Rpph1-201ENSMUST00000175096 319 ntBASIC14.17□□□□□ -0.14
Vsx2Q61412 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.17□□□□□ -0.14
Vsx2Q61412 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.17□□□□□ -0.14
Vsx2Q61412 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx2Q61412 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx2Q61412 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx2Q61412 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx2Q61412 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx2Q61412 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx2Q61412 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx2Q61412 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vsx2Q61412 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx2Q61412 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx2Q61412 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx2Q61412 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Vsx2Q61412 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.16□□□□□ -0.14
Vsx2Q61412 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx2Q61412 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx2Q61412 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Vsx2Q61412 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx2Q61412 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.16□□□□□ -0.14
Vsx2Q61412 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx2Q61412 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx2Q61412 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx2Q61412 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx2Q61412 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.16□□□□□ -0.14
Vsx2Q61412 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx2Q61412 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.16□□□□□ -0.14
Vsx2Q61412 Gm27494-201ENSMUST00000184735 189 ntBASIC14.16□□□□□ -0.14
Vsx2Q61412 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.16□□□□□ -0.14
Vsx2Q61412 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.16□□□□□ -0.14
Vsx2Q61412 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx2Q61412 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx2Q61412 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx2Q61412 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx2Q61412 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Vsx2Q61412 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx2Q61412 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vsx2Q61412 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx2Q61412 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx2Q61412 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx2Q61412 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Vsx2Q61412 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx2Q61412 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx2Q61412 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx2Q61412 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx2Q61412 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Vsx2Q61412 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Vsx2Q61412 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
Vsx2Q61412 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx2Q61412 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Vsx2Q61412 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Vsx2Q61412 Mir1895-201ENSMUST00000122615 79 ntBASIC14.15□□□□□ -0.14
Vsx2Q61412 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.15□□□□□ -0.14
Vsx2Q61412 Gm20553-201ENSMUST00000204205 844 ntBASIC14.15□□□□□ -0.14
Vsx2Q61412 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.15□□□□□ -0.14
Vsx2Q61412 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx2Q61412 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.15□□□□□ -0.14
Vsx2Q61412 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx2Q61412 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vsx2Q61412 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Vsx2Q61412 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms