Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mre11Q61216 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mre11Q61216 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Mre11Q61216 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Mre11Q61216 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mre11Q61216 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC17.4■□□□□ 0.38
Mre11Q61216 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
Mre11Q61216 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Mre11Q61216 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mre11Q61216 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mre11Q61216 Gm38102-201ENSMUST00000192791 1935 ntBASIC17.4■□□□□ 0.38
Mre11Q61216 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mre11Q61216 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC17.4■□□□□ 0.38
Mre11Q61216 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mre11Q61216 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mre11Q61216 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mre11Q61216 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mre11Q61216 Gm10305-201ENSMUST00000195331 2475 ntBASIC17.4■□□□□ 0.38
Mre11Q61216 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mre11Q61216 AC139054.1-201ENSMUST00000226898 1598 ntBASIC17.4■□□□□ 0.38
Mre11Q61216 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mre11Q61216 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Mre11Q61216 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Mre11Q61216 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Mre11Q61216 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Mre11Q61216 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Mre11Q61216 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Mre11Q61216 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mre11Q61216 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Mre11Q61216 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mre11Q61216 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mre11Q61216 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC17.39■□□□□ 0.37
Mre11Q61216 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.39■□□□□ 0.37
Mre11Q61216 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Mre11Q61216 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.39■□□□□ 0.37
Mre11Q61216 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Mre11Q61216 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mre11Q61216 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.39■□□□□ 0.37
Mre11Q61216 Gm7977-201ENSMUST00000193787 748 ntBASIC17.39■□□□□ 0.37
Mre11Q61216 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.39■□□□□ 0.37
Mre11Q61216 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.39■□□□□ 0.37
Mre11Q61216 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Mre11Q61216 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Mre11Q61216 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Mre11Q61216 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mre11Q61216 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.39■□□□□ 0.37
Mre11Q61216 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mre11Q61216 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mre11Q61216 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mre11Q61216 Gm38577-201ENSMUST00000221531 4545 ntBASIC17.39■□□□□ 0.37
Mre11Q61216 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Mre11Q61216 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
Mre11Q61216 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mre11Q61216 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mre11Q61216 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mre11Q61216 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Mre11Q61216 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC17.38■□□□□ 0.37
Mre11Q61216 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mre11Q61216 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Mre11Q61216 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mre11Q61216 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Mre11Q61216 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mre11Q61216 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mre11Q61216 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Mre11Q61216 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Mre11Q61216 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Mre11Q61216 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Mre11Q61216 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mre11Q61216 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Mre11Q61216 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Mre11Q61216 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mre11Q61216 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mre11Q61216 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Mre11Q61216 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mre11Q61216 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mre11Q61216 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Mre11Q61216 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mre11Q61216 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mre11Q61216 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mre11Q61216 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Mre11Q61216 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.37■□□□□ 0.37
Mre11Q61216 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Mre11Q61216 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mre11Q61216 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mre11Q61216 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mre11Q61216 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mre11Q61216 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mre11Q61216 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Mre11Q61216 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mre11Q61216 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mre11Q61216 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC17.37■□□□□ 0.37
Mre11Q61216 Gm20632-201ENSMUST00000176760 2427 ntBASIC17.37■□□□□ 0.37
Mre11Q61216 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mre11Q61216 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Mre11Q61216 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Mre11Q61216 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.37■□□□□ 0.37
Mre11Q61216 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC17.37■□□□□ 0.37
Mre11Q61216 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mre11Q61216 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Mre11Q61216 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms